Search with FASTA

Choose program and database(s) to query:
Program:

Databases:
Protein
All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
SWISS-PROT protein sequence database
Drosophila genome proteins
Yeast (Saccharomyces cerevisiae)
Escherichia coli genomic CDS translations
Brookhaven Protein Data Bank
Alu repeats from REPBASE
DNA
All GenBank+EMBL+DDBJ+PDB sequences
Drosophila genome nucleotides
Genome Survey Sequence
Yeast (Saccharomyces cerevisiae)
Escherichia coli genomic nucleotide sequences
Brookhaven Protein Data Bank
Vector subset of GenBank
Database of mitochondrial sequences
Alu repeats from REPBASE
Local
Sulfolobus Proteins
Nostoc Punctiforme
Anabaena PCC7820

Sequence type:
Protein DNA (both strands) DNA (forward only) DNA (rev-comp only)

Enter query sequence:  Subset range:
Entrez protein sequence browser

Entrez DNA sequence browser



Other options:
Ktup:
Protein matrix:
DNA matrix:
gap:
ext:
misc:

Output limits:
E(): Highest E(): scores: alignments:



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Copyright 1988, 1991, 1992, 1993, 1994 1995, 1997, 1999 by William R. Pearson and the University of Virginia. All rights reserved. The FASTA program and documentation may not be sold or incorporated into a commercial product, in whole or in part, without written consent of William R. Pearson and the University of Virginia.