Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | AAAGGAT,MIR-501 |
| Enrichment Score (ES) | 0.39720446 |
| Normalized Enrichment Score (NES) | 1.4482158 |
| Nominal p-value | 0.049212597 |
| FDR q-value | 0.30106857 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAP3K8 | MAP3K8 Entrez, Source | mitogen-activated protein kinase kinase kinase 8 | 9 | 0.350 | 0.1402 | Yes |
| 2 | LPIN1 | LPIN1 Entrez, Source | lipin 1 | 182 | 0.151 | 0.1882 | Yes |
| 3 | PRKCE | PRKCE Entrez, Source | protein kinase C, epsilon | 467 | 0.120 | 0.2152 | Yes |
| 4 | KCND2 | KCND2 Entrez, Source | potassium voltage-gated channel, Shal-related subfamily, member 2 | 569 | 0.112 | 0.2527 | Yes |
| 5 | CLK1 | CLK1 Entrez, Source | CDC-like kinase 1 | 1018 | 0.091 | 0.2556 | Yes |
| 6 | UBAP1 | UBAP1 Entrez, Source | ubiquitin associated protein 1 | 1292 | 0.080 | 0.2674 | Yes |
| 7 | HAS2 | HAS2 Entrez, Source | hyaluronan synthase 2 | 1343 | 0.079 | 0.2954 | Yes |
| 8 | TRIM39 | TRIM39 Entrez, Source | tripartite motif-containing 39 | 1588 | 0.073 | 0.3063 | Yes |
| 9 | CUGBP2 | CUGBP2 Entrez, Source | CUG triplet repeat, RNA binding protein 2 | 1969 | 0.063 | 0.3031 | Yes |
| 10 | SRR | SRR Entrez, Source | serine racemase | 2120 | 0.060 | 0.3158 | Yes |
| 11 | TNNI2 | TNNI2 Entrez, Source | troponin I type 2 (skeletal, fast) | 2401 | 0.054 | 0.3163 | Yes |
| 12 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 2506 | 0.051 | 0.3292 | Yes |
| 13 | ADIPOR2 | ADIPOR2 Entrez, Source | adiponectin receptor 2 | 2509 | 0.051 | 0.3497 | Yes |
| 14 | SCN3A | SCN3A Entrez, Source | sodium channel, voltage-gated, type III, alpha | 2647 | 0.049 | 0.3592 | Yes |
| 15 | RET | RET Entrez, Source | ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease) | 2793 | 0.046 | 0.3668 | Yes |
| 16 | ERRFI1 | ERRFI1 Entrez, Source | ERBB receptor feedback inhibitor 1 | 2825 | 0.046 | 0.3829 | Yes |
| 17 | CART1 | CART1 Entrez, Source | cartilage paired-class homeoprotein 1 | 2975 | 0.043 | 0.3892 | Yes |
| 18 | DCX | DCX Entrez, Source | doublecortex; lissencephaly, X-linked (doublecortin) | 3092 | 0.042 | 0.3972 | Yes |
| 19 | GIF | GIF Entrez, Source | gastric intrinsic factor (vitamin B synthesis) | 3643 | 0.033 | 0.3692 | No |
| 20 | NFIL3 | NFIL3 Entrez, Source | nuclear factor, interleukin 3 regulated | 3661 | 0.033 | 0.3811 | No |
| 21 | SYT7 | SYT7 Entrez, Source | synaptotagmin VII | 3712 | 0.032 | 0.3904 | No |
| 22 | SFRS2 | SFRS2 Entrez, Source | splicing factor, arginine/serine-rich 2 | 3869 | 0.030 | 0.3907 | No |
| 23 | MAP2K1 | MAP2K1 Entrez, Source | mitogen-activated protein kinase kinase 1 | 4172 | 0.026 | 0.3785 | No |
| 24 | SGPP1 | SGPP1 Entrez, Source | sphingosine-1-phosphate phosphatase 1 | 4322 | 0.024 | 0.3771 | No |
| 25 | ACACA | ACACA Entrez, Source | acetyl-Coenzyme A carboxylase alpha | 4652 | 0.020 | 0.3604 | No |
| 26 | JUN | JUN Entrez, Source | jun oncogene | 4841 | 0.018 | 0.3535 | No |
| 27 | CELSR2 | CELSR2 Entrez, Source | cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) | 4970 | 0.016 | 0.3504 | No |
| 28 | PPP1CB | PPP1CB Entrez, Source | protein phosphatase 1, catalytic subunit, beta isoform | 5079 | 0.015 | 0.3483 | No |
| 29 | ATP6V1H | ATP6V1H Entrez, Source | ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H | 5164 | 0.014 | 0.3477 | No |
| 30 | PDK1 | PDK1 Entrez, Source | pyruvate dehydrogenase kinase, isozyme 1 | 5686 | 0.008 | 0.3118 | No |
| 31 | TOMM70A | TOMM70A Entrez, Source | translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) | 5761 | 0.007 | 0.3091 | No |
| 32 | CTDSP1 | CTDSP1 Entrez, Source | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 | 5792 | 0.007 | 0.3096 | No |
| 33 | SOX11 | SOX11 Entrez, Source | SRY (sex determining region Y)-box 11 | 5904 | 0.005 | 0.3035 | No |
| 34 | HES5 | HES5 Entrez, Source | hairy and enhancer of split 5 (Drosophila) | 6329 | 0.001 | 0.2719 | No |
| 35 | SYNJ1 | SYNJ1 Entrez, Source | synaptojanin 1 | 6654 | -0.003 | 0.2485 | No |
| 36 | ROBO2 | ROBO2 Entrez, Source | roundabout, axon guidance receptor, homolog 2 (Drosophila) | 6677 | -0.003 | 0.2480 | No |
| 37 | VDAC2 | VDAC2 Entrez, Source | voltage-dependent anion channel 2 | 6725 | -0.003 | 0.2457 | No |
| 38 | CD164 | CD164 Entrez, Source | CD164 molecule, sialomucin | 6728 | -0.003 | 0.2468 | No |
| 39 | LEPROTL1 | LEPROTL1 Entrez, Source | leptin receptor overlapping transcript-like 1 | 6749 | -0.003 | 0.2466 | No |
| 40 | PITX2 | PITX2 Entrez, Source | paired-like homeodomain transcription factor 2 | 6901 | -0.005 | 0.2371 | No |
| 41 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 7287 | -0.009 | 0.2116 | No |
| 42 | ALS2 | ALS2 Entrez, Source | amyotrophic lateral sclerosis 2 (juvenile) | 7724 | -0.013 | 0.1839 | No |
| 43 | BCLAF1 | BCLAF1 Entrez, Source | BCL2-associated transcription factor 1 | 7828 | -0.014 | 0.1817 | No |
| 44 | NFIX | NFIX Entrez, Source | nuclear factor I/X (CCAAT-binding transcription factor) | 7909 | -0.015 | 0.1816 | No |
| 45 | SNAP29 | SNAP29 Entrez, Source | synaptosomal-associated protein, 29kDa | 8514 | -0.021 | 0.1445 | No |
| 46 | TAF5L | TAF5L Entrez, Source | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa | 8746 | -0.023 | 0.1365 | No |
| 47 | SENP3 | SENP3 Entrez, Source | SUMO1/sentrin/SMT3 specific peptidase 3 | 8901 | -0.025 | 0.1350 | No |
| 48 | RDX | RDX Entrez, Source | radixin | 9144 | -0.027 | 0.1278 | No |
| 49 | NPR3 | NPR3 Entrez, Source | natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) | 9749 | -0.034 | 0.0962 | No |
| 50 | ADCYAP1 | ADCYAP1 Entrez, Source | adenylate cyclase activating polypeptide 1 (pituitary) | 9783 | -0.035 | 0.1078 | No |
| 51 | SLC25A3 | SLC25A3 Entrez, Source | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 | 9966 | -0.037 | 0.1089 | No |
| 52 | NFASC | NFASC Entrez, Source | neurofascin homolog (chicken) | 10254 | -0.040 | 0.1034 | No |
| 53 | QKI | QKI Entrez, Source | quaking homolog, KH domain RNA binding (mouse) | 10287 | -0.041 | 0.1173 | No |
| 54 | SEPHS1 | SEPHS1 Entrez, Source | selenophosphate synthetase 1 | 11314 | -0.057 | 0.0631 | No |
| 55 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 11497 | -0.060 | 0.0737 | No |
| 56 | ACADSB | ACADSB Entrez, Source | acyl-Coenzyme A dehydrogenase, short/branched chain | 13150 | -0.162 | 0.0145 | No |
