Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | BRAIN_DEVELOPMENT |
| Enrichment Score (ES) | 0.5626779 |
| Normalized Enrichment Score (NES) | 1.7188891 |
| Nominal p-value | 0.015655577 |
| FDR q-value | 0.1223482 |
| FWER p-Value | 0.999 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 10 | 0.347 | 0.2506 | Yes |
| 2 | CNTN4 | CNTN4 Entrez, Source | contactin 4 | 510 | 0.116 | 0.2976 | Yes |
| 3 | SLIT1 | SLIT1 Entrez, Source | slit homolog 1 (Drosophila) | 571 | 0.112 | 0.3744 | Yes |
| 4 | CDK5R1 | CDK5R1 Entrez, Source | cyclin-dependent kinase 5, regulatory subunit 1 (p35) | 630 | 0.108 | 0.4486 | Yes |
| 5 | SIX3 | SIX3 Entrez, Source | sine oculis homeobox homolog 3 (Drosophila) | 778 | 0.100 | 0.5104 | Yes |
| 6 | GPR56 | GPR56 Entrez, Source | G protein-coupled receptor 56 | 1381 | 0.078 | 0.5219 | Yes |
| 7 | NF1 | NF1 Entrez, Source | neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) | 1548 | 0.073 | 0.5627 | Yes |
| 8 | OTX2 | OTX2 Entrez, Source | orthodenticle homolog 2 (Drosophila) | 3447 | 0.036 | 0.4463 | No |
| 9 | ECE2 | ECE2 Entrez, Source | endothelin converting enzyme 2 | 3477 | 0.036 | 0.4699 | No |
| 10 | NNAT | NNAT Entrez, Source | neuronatin | 3890 | 0.030 | 0.4606 | No |
| 11 | PITPNM1 | PITPNM1 Entrez, Source | phosphatidylinositol transfer protein, membrane-associated 1 | 4270 | 0.025 | 0.4503 | No |
| 12 | FOXG1 | 5170 | 0.014 | 0.3930 | No | ||
| 13 | POU6F1 | POU6F1 Entrez, Source | POU domain, class 6, transcription factor 1 | 5518 | 0.010 | 0.3742 | No |
| 14 | SHH | SHH Entrez, Source | sonic hedgehog homolog (Drosophila) | 5903 | 0.005 | 0.3494 | No |
| 15 | ROBO2 | ROBO2 Entrez, Source | roundabout, axon guidance receptor, homolog 2 (Drosophila) | 6677 | -0.003 | 0.2933 | No |
| 16 | NDUFS4 | NDUFS4 Entrez, Source | NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) | 8040 | -0.016 | 0.2027 | No |
| 17 | ZIC1 | ZIC1 Entrez, Source | Zic family member 1 (odd-paired homolog, Drosophila) | 8326 | -0.019 | 0.1951 | No |
| 18 | ALK | ALK Entrez, Source | anaplastic lymphoma kinase (Ki-1) | 8660 | -0.022 | 0.1864 | No |
| 19 | UNC5C | UNC5C Entrez, Source | unc-5 homolog C (C. elegans) | 10079 | -0.038 | 0.1076 | No |
| 20 | NCOA6 | NCOA6 Entrez, Source | nuclear receptor coactivator 6 | 10571 | -0.044 | 0.1029 | No |
| 21 | PPT1 | PPT1 Entrez, Source | palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) | 11303 | -0.057 | 0.0893 | No |
| 22 | PHGDH | PHGDH Entrez, Source | phosphoglycerate dehydrogenase | 12426 | -0.088 | 0.0688 | No |
