Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | CHROMATIN |
| Enrichment Score (ES) | -0.5406457 |
| Normalized Enrichment Score (NES) | -1.5267249 |
| Nominal p-value | 0.05376344 |
| FDR q-value | 0.2694328 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | JUNB | JUNB Entrez, Source | jun B proto-oncogene | 816 | 0.099 | 0.0460 | No |
| 2 | JUND | JUND Entrez, Source | jun D proto-oncogene | 4321 | 0.024 | -0.1905 | No |
| 3 | DNMT3A | DNMT3A Entrez, Source | DNA (cytosine-5-)-methyltransferase 3 alpha | 4742 | 0.019 | -0.2011 | No |
| 4 | NPM2 | NPM2 Entrez, Source | nucleophosmin/nucleoplasmin, 2 | 5044 | 0.016 | -0.2069 | No |
| 5 | APTX | APTX Entrez, Source | aprataxin | 5249 | 0.013 | -0.2078 | No |
| 6 | NUFIP1 | NUFIP1 Entrez, Source | nuclear fragile X mental retardation protein interacting protein 1 | 5688 | 0.008 | -0.2320 | No |
| 7 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 6161 | 0.003 | -0.2643 | No |
| 8 | RAN | RAN Entrez, Source | RAN, member RAS oncogene family | 7634 | -0.012 | -0.3620 | No |
| 9 | ATRX | ATRX Entrez, Source | alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | 7684 | -0.012 | -0.3523 | No |
| 10 | HMGN1 | HMGN1 Entrez, Source | high-mobility group nucleosome binding domain 1 | 7731 | -0.013 | -0.3418 | No |
| 11 | TNP1 | TNP1 Entrez, Source | transition protein 1 (during histone to protamine replacement) | 9171 | -0.028 | -0.4197 | No |
| 12 | H2AFY | H2AFY Entrez, Source | H2A histone family, member Y | 9820 | -0.035 | -0.4300 | No |
| 13 | KLHDC3 | KLHDC3 Entrez, Source | kelch domain containing 3 | 10035 | -0.038 | -0.4053 | No |
| 14 | PAM | PAM Entrez, Source | peptidylglycine alpha-amidating monooxygenase | 11839 | -0.068 | -0.4665 | Yes |
| 15 | RB1 | RB1 Entrez, Source | retinoblastoma 1 (including osteosarcoma) | 12607 | -0.097 | -0.4186 | Yes |
| 16 | TMPO | TMPO Entrez, Source | thymopoietin | 12812 | -0.111 | -0.3132 | Yes |
| 17 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 13072 | -0.143 | -0.1770 | Yes |
| 18 | TIMELESS | TIMELESS Entrez, Source | timeless homolog (Drosophila) | 13192 | -0.182 | 0.0113 | Yes |
