Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | CMV_IE86_UP |
| Enrichment Score (ES) | -0.50683665 |
| Normalized Enrichment Score (NES) | -1.5663612 |
| Nominal p-value | 0.03816794 |
| FDR q-value | 0.25262833 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 538 | 0.115 | 0.0242 | No |
| 2 | DCK | DCK Entrez, Source | deoxycytidine kinase | 1598 | 0.072 | -0.0145 | No |
| 3 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 1750 | 0.069 | 0.0129 | No |
| 4 | DHFR | DHFR Entrez, Source | dihydrofolate reductase | 2524 | 0.051 | -0.0163 | No |
| 5 | BTG3 | BTG3 Entrez, Source | BTG family, member 3 | 2641 | 0.049 | 0.0027 | No |
| 6 | PTTG1 | PTTG1 Entrez, Source | pituitary tumor-transforming 1 | 2878 | 0.045 | 0.0103 | No |
| 7 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 3887 | 0.030 | -0.0485 | No |
| 8 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 5100 | 0.015 | -0.1311 | No |
| 9 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 6161 | 0.003 | -0.2091 | No |
| 10 | CASP3 | CASP3 Entrez, Source | caspase 3, apoptosis-related cysteine peptidase | 7301 | -0.009 | -0.2898 | No |
| 11 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 8303 | -0.019 | -0.3544 | No |
| 12 | UMPS | UMPS Entrez, Source | uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) | 8391 | -0.020 | -0.3499 | No |
| 13 | TFAM | TFAM Entrez, Source | transcription factor A, mitochondrial | 8685 | -0.023 | -0.3591 | No |
| 14 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 9143 | -0.027 | -0.3780 | No |
| 15 | CCNE1 | CCNE1 Entrez, Source | cyclin E1 | 9404 | -0.030 | -0.3804 | No |
| 16 | RFC2 | RFC2 Entrez, Source | replication factor C (activator 1) 2, 40kDa | 10249 | -0.040 | -0.4212 | No |
| 17 | BARD1 | BARD1 Entrez, Source | BRCA1 associated RING domain 1 | 11085 | -0.053 | -0.4543 | Yes |
| 18 | TMEM106C | TMEM106C Entrez, Source | transmembrane protein 106C | 11481 | -0.060 | -0.4501 | Yes |
| 19 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 11497 | -0.060 | -0.4172 | Yes |
| 20 | POLD3 | POLD3 Entrez, Source | polymerase (DNA-directed), delta 3, accessory subunit | 12692 | -0.103 | -0.4490 | Yes |
| 21 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 12735 | -0.105 | -0.3928 | Yes |
| 22 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 12758 | -0.107 | -0.3338 | Yes |
| 23 | RFC3 | RFC3 Entrez, Source | replication factor C (activator 1) 3, 38kDa | 12915 | -0.123 | -0.2762 | Yes |
| 24 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 13087 | -0.147 | -0.2062 | Yes |
| 25 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13196 | -0.186 | -0.1093 | Yes |
| 26 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 13232 | -0.213 | 0.0083 | Yes |
