Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | GAANYNYGACNY_UNKNOWN |
| Enrichment Score (ES) | 0.55395335 |
| Normalized Enrichment Score (NES) | 1.8061514 |
| Nominal p-value | 0.003992016 |
| FDR q-value | 0.077922516 |
| FWER p-Value | 0.977 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | NR2F1 | NR2F1 Entrez, Source | nuclear receptor subfamily 2, group F, member 1 | 41 | 0.224 | 0.1316 | Yes |
| 2 | CDKN1A | CDKN1A Entrez, Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 491 | 0.118 | 0.1689 | Yes |
| 3 | MID1 | MID1 Entrez, Source | midline 1 (Opitz/BBB syndrome) | 731 | 0.103 | 0.2127 | Yes |
| 4 | GRID2 | GRID2 Entrez, Source | glutamate receptor, ionotropic, delta 2 | 987 | 0.092 | 0.2488 | Yes |
| 5 | FGF23 | FGF23 Entrez, Source | fibroblast growth factor 23 | 994 | 0.092 | 0.3034 | Yes |
| 6 | NR4A2 | NR4A2 Entrez, Source | nuclear receptor subfamily 4, group A, member 2 | 1011 | 0.091 | 0.3568 | Yes |
| 7 | PAX6 | PAX6 Entrez, Source | paired box gene 6 (aniridia, keratitis) | 1024 | 0.091 | 0.4103 | Yes |
| 8 | SLC1A1 | SLC1A1 Entrez, Source | solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 | 1453 | 0.076 | 0.4239 | Yes |
| 9 | SHC1 | SHC1 Entrez, Source | SHC (Src homology 2 domain containing) transforming protein 1 | 1493 | 0.075 | 0.4660 | Yes |
| 10 | COL15A1 | COL15A1 Entrez, Source | collagen, type XV, alpha 1 | 1838 | 0.067 | 0.4801 | Yes |
| 11 | HSD11B1 | HSD11B1 Entrez, Source | hydroxysteroid (11-beta) dehydrogenase 1 | 2044 | 0.061 | 0.5015 | Yes |
| 12 | HTF9C | HTF9C Entrez, Source | - | 2553 | 0.051 | 0.4937 | Yes |
| 13 | TLE3 | TLE3 Entrez, Source | transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) | 2706 | 0.048 | 0.5110 | Yes |
| 14 | STAT3 | STAT3 Entrez, Source | signal transducer and activator of transcription 3 (acute-phase response factor) | 2887 | 0.045 | 0.5244 | Yes |
| 15 | NFATC4 | NFATC4 Entrez, Source | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 | 3046 | 0.042 | 0.5379 | Yes |
| 16 | SULF1 | SULF1 Entrez, Source | sulfatase 1 | 3160 | 0.041 | 0.5540 | Yes |
| 17 | IGF1 | IGF1 Entrez, Source | insulin-like growth factor 1 (somatomedin C) | 4287 | 0.025 | 0.4843 | No |
| 18 | GDA | GDA Entrez, Source | guanine deaminase | 4908 | 0.017 | 0.4480 | No |
| 19 | SCN4A | SCN4A Entrez, Source | sodium channel, voltage-gated, type IV, alpha | 5567 | 0.009 | 0.4042 | No |
| 20 | SP4 | SP4 Entrez, Source | Sp4 transcription factor | 5618 | 0.009 | 0.4058 | No |
| 21 | SUMO1 | SUMO1 Entrez, Source | SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) | 6246 | 0.002 | 0.3598 | No |
| 22 | DNAJA2 | DNAJA2 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 2 | 6495 | -0.001 | 0.3416 | No |
| 23 | NR2C2 | NR2C2 Entrez, Source | nuclear receptor subfamily 2, group C, member 2 | 6755 | -0.003 | 0.3242 | No |
| 24 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 7287 | -0.009 | 0.2894 | No |
| 25 | GSPT1 | GSPT1 Entrez, Source | G1 to S phase transition 1 | 7697 | -0.012 | 0.2662 | No |
| 26 | HHEX | HHEX Entrez, Source | homeobox, hematopoietically expressed | 8540 | -0.021 | 0.2156 | No |
| 27 | PAPD4 | PAPD4 Entrez, Source | PAP associated domain containing 4 | 8642 | -0.022 | 0.2214 | No |
| 28 | PGAM2 | PGAM2 Entrez, Source | phosphoglycerate mutase 2 (muscle) | 8941 | -0.025 | 0.2143 | No |
| 29 | PLAC1 | PLAC1 Entrez, Source | placenta-specific 1 | 8944 | -0.025 | 0.2294 | No |
| 30 | TCF12 | TCF12 Entrez, Source | transcription factor 12 (HTF4, helix-loop-helix transcription factors 4) | 10869 | -0.049 | 0.1143 | No |
| 31 | RQCD1 | RQCD1 Entrez, Source | RCD1 required for cell differentiation1 homolog (S. pombe) | 11296 | -0.057 | 0.1164 | No |
| 32 | BRE | BRE Entrez, Source | brain and reproductive organ-expressed (TNFRSF1A modulator) | 11575 | -0.062 | 0.1327 | No |
