Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | GGARNTKYCCA_UNKNOWN |
| Enrichment Score (ES) | 0.44914463 |
| Normalized Enrichment Score (NES) | 1.5387092 |
| Nominal p-value | 0.027237354 |
| FDR q-value | 0.2401241 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAP3K8 | MAP3K8 Entrez, Source | mitogen-activated protein kinase kinase kinase 8 | 9 | 0.350 | 0.1598 | Yes |
| 2 | PPFIA3 | PPFIA3 Entrez, Source | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 | 133 | 0.167 | 0.2268 | Yes |
| 3 | EGF | EGF Entrez, Source | epidermal growth factor (beta-urogastrone) | 392 | 0.126 | 0.2650 | Yes |
| 4 | NTRK3 | NTRK3 Entrez, Source | neurotrophic tyrosine kinase, receptor, type 3 | 474 | 0.120 | 0.3138 | Yes |
| 5 | CD86 | CD86 Entrez, Source | CD86 molecule | 1107 | 0.087 | 0.3061 | Yes |
| 6 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 1122 | 0.086 | 0.3446 | Yes |
| 7 | GABRE | GABRE Entrez, Source | gamma-aminobutyric acid (GABA) A receptor, epsilon | 1285 | 0.081 | 0.3694 | Yes |
| 8 | PELO | PELO Entrez, Source | pelota homolog (Drosophila) | 1540 | 0.074 | 0.3840 | Yes |
| 9 | MEF2D | MEF2D Entrez, Source | MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D) | 1595 | 0.073 | 0.4132 | Yes |
| 10 | IFNB1 | IFNB1 Entrez, Source | interferon, beta 1, fibroblast | 1990 | 0.063 | 0.4124 | Yes |
| 11 | TMEM27 | TMEM27 Entrez, Source | transmembrane protein 27 | 2073 | 0.061 | 0.4340 | Yes |
| 12 | PTGES | PTGES Entrez, Source | prostaglandin E synthase | 2220 | 0.057 | 0.4491 | Yes |
| 13 | RAMP2 | RAMP2 Entrez, Source | receptor (calcitonin) activity modifying protein 2 | 3158 | 0.041 | 0.3974 | No |
| 14 | SOCS2 | SOCS2 Entrez, Source | suppressor of cytokine signaling 2 | 3200 | 0.040 | 0.4127 | No |
| 15 | MSX1 | MSX1 Entrez, Source | msh homeobox homolog 1 (Drosophila) | 3576 | 0.034 | 0.4002 | No |
| 16 | SLC6A9 | SLC6A9 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | 3581 | 0.034 | 0.4155 | No |
| 17 | STIP1 | STIP1 Entrez, Source | stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) | 3797 | 0.031 | 0.4136 | No |
| 18 | HCN1 | HCN1 Entrez, Source | hyperpolarization activated cyclic nucleotide-gated potassium channel 1 | 3809 | 0.031 | 0.4270 | No |
| 19 | ITGA1 | ITGA1 Entrez, Source | integrin, alpha 1 | 3993 | 0.029 | 0.4263 | No |
| 20 | VEGF | VEGF Entrez, Source | vascular endothelial growth factor | 4407 | 0.023 | 0.4059 | No |
| 21 | DNAJA1 | DNAJA1 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 1 | 4679 | 0.020 | 0.3946 | No |
| 22 | NELL2 | NELL2 Entrez, Source | NEL-like 2 (chicken) | 5064 | 0.015 | 0.3727 | No |
| 23 | ATP1B3 | ATP1B3 Entrez, Source | ATPase, Na+/K+ transporting, beta 3 polypeptide | 6238 | 0.002 | 0.2854 | No |
| 24 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 6719 | -0.003 | 0.2507 | No |
| 25 | CAPN9 | CAPN9 Entrez, Source | calpain 9 | 6863 | -0.004 | 0.2420 | No |
| 26 | SRPX | SRPX Entrez, Source | sushi-repeat-containing protein, X-linked | 7268 | -0.008 | 0.2154 | No |
| 27 | XPO1 | XPO1 Entrez, Source | exportin 1 (CRM1 homolog, yeast) | 7439 | -0.010 | 0.2072 | No |
| 28 | SCAMP1 | SCAMP1 Entrez, Source | secretory carrier membrane protein 1 | 9586 | -0.032 | 0.0608 | No |
| 29 | NFIB | NFIB Entrez, Source | nuclear factor I/B | 9610 | -0.033 | 0.0741 | No |
| 30 | OGT | OGT Entrez, Source | O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) | 9640 | -0.033 | 0.0872 | No |
| 31 | CYR61 | CYR61 Entrez, Source | cysteine-rich, angiogenic inducer, 61 | 10367 | -0.041 | 0.0516 | No |
| 32 | CPLX2 | CPLX2 Entrez, Source | complexin 2 | 10609 | -0.045 | 0.0540 | No |
| 33 | CX36 | CX36 Entrez, Source | - | 10850 | -0.049 | 0.0584 | No |
| 34 | DLGAP4 | DLGAP4 Entrez, Source | discs, large (Drosophila) homolog-associated protein 4 | 11287 | -0.057 | 0.0516 | No |
| 35 | NPDC1 | NPDC1 Entrez, Source | neural proliferation, differentiation and control, 1 | 11942 | -0.071 | 0.0349 | No |
| 36 | FXYD2 | FXYD2 Entrez, Source | FXYD domain containing ion transport regulator 2 | 11964 | -0.072 | 0.0661 | No |
| 37 | GPM6A | GPM6A Entrez, Source | glycoprotein M6A | 12264 | -0.082 | 0.0810 | No |
