Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | HOGERKORP_CD44_DN |
| Enrichment Score (ES) | 0.61103195 |
| Normalized Enrichment Score (NES) | 1.6992251 |
| Nominal p-value | 0.012345679 |
| FDR q-value | 0.13242778 |
| FWER p-Value | 0.999 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | LYZ | LYZ Entrez, Source | lysozyme (renal amyloidosis) | 34 | 0.230 | 0.2585 | Yes |
| 2 | MX2 | MX2 Entrez, Source | myxovirus (influenza virus) resistance 2 (mouse) | 64 | 0.196 | 0.4787 | Yes |
| 3 | NUCB2 | NUCB2 Entrez, Source | nucleobindin 2 | 1811 | 0.067 | 0.4239 | Yes |
| 4 | GCG | GCG Entrez, Source | glucagon | 2319 | 0.055 | 0.4484 | Yes |
| 5 | EFNA3 | EFNA3 Entrez, Source | ephrin-A3 | 2420 | 0.053 | 0.5014 | Yes |
| 6 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 2506 | 0.051 | 0.5534 | Yes |
| 7 | HTR1A | HTR1A Entrez, Source | 5-hydroxytryptamine (serotonin) receptor 1A | 2515 | 0.051 | 0.6110 | Yes |
| 8 | APOC3 | APOC3 Entrez, Source | apolipoprotein C-III | 4715 | 0.019 | 0.4681 | No |
| 9 | PRKACA | PRKACA Entrez, Source | protein kinase, cAMP-dependent, catalytic, alpha | 4870 | 0.018 | 0.4767 | No |
| 10 | TERF1 | TERF1 Entrez, Source | telomeric repeat binding factor (NIMA-interacting) 1 | 5667 | 0.008 | 0.4264 | No |
| 11 | SLC18A1 | SLC18A1 Entrez, Source | solute carrier family 18 (vesicular monoamine), member 1 | 6664 | -0.003 | 0.3547 | No |
| 12 | PLK1 | PLK1 Entrez, Source | polo-like kinase 1 (Drosophila) | 6701 | -0.003 | 0.3553 | No |
| 13 | PIK3R3 | PIK3R3 Entrez, Source | phosphoinositide-3-kinase, regulatory subunit 3 (p55, gamma) | 7359 | -0.009 | 0.3163 | No |
| 14 | MNAT1 | MNAT1 Entrez, Source | menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) | 9616 | -0.033 | 0.1845 | No |
| 15 | SNCA | SNCA Entrez, Source | synuclein, alpha (non A4 component of amyloid precursor) | 12324 | -0.084 | 0.0764 | No |
