Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | IDX_TSA_DN_CLUSTER2 |
| Enrichment Score (ES) | -0.616533 |
| Normalized Enrichment Score (NES) | -2.1788118 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.008386214 |
| FWER p-Value | 0.023 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FGF7 | FGF7 Entrez, Source | fibroblast growth factor 7 (keratinocyte growth factor) | 1778 | 0.068 | -0.1110 | No |
| 2 | PTGIS | PTGIS Entrez, Source | prostaglandin I2 (prostacyclin) synthase | 2566 | 0.050 | -0.1533 | No |
| 3 | LOX | LOX Entrez, Source | lysyl oxidase | 3959 | 0.029 | -0.2483 | No |
| 4 | LAMP2 | LAMP2 Entrez, Source | lysosomal-associated membrane protein 2 | 4416 | 0.023 | -0.2749 | No |
| 5 | SLC7A5 | SLC7A5 Entrez, Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | 4803 | 0.018 | -0.2977 | No |
| 6 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 4868 | 0.018 | -0.2966 | No |
| 7 | ZFP36L2 | ZFP36L2 Entrez, Source | zinc finger protein 36, C3H type-like 2 | 5350 | 0.012 | -0.3288 | No |
| 8 | PDPN | PDPN Entrez, Source | podoplanin | 5603 | 0.009 | -0.3447 | No |
| 9 | NCAM1 | NCAM1 Entrez, Source | neural cell adhesion molecule 1 | 5996 | 0.005 | -0.3727 | No |
| 10 | MAP1LC3B | MAP1LC3B Entrez, Source | microtubule-associated protein 1 light chain 3 beta | 6354 | 0.001 | -0.3993 | No |
| 11 | RAB31 | RAB31 Entrez, Source | RAB31, member RAS oncogene family | 6361 | 0.001 | -0.3995 | No |
| 12 | TINP1 | TINP1 Entrez, Source | - | 7390 | -0.009 | -0.4737 | No |
| 13 | SMAD6 | SMAD6 Entrez, Source | SMAD, mothers against DPP homolog 6 (Drosophila) | 7552 | -0.011 | -0.4821 | No |
| 14 | BAX | BAX Entrez, Source | BCL2-associated X protein | 7784 | -0.013 | -0.4950 | No |
| 15 | SERPINF1 | SERPINF1 Entrez, Source | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 | 7864 | -0.014 | -0.4962 | No |
| 16 | BDNF | BDNF Entrez, Source | brain-derived neurotrophic factor | 7868 | -0.014 | -0.4917 | No |
| 17 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 7897 | -0.014 | -0.4889 | No |
| 18 | SCPEP1 | SCPEP1 Entrez, Source | serine carboxypeptidase 1 | 7920 | -0.015 | -0.4856 | No |
| 19 | CAPG | CAPG Entrez, Source | capping protein (actin filament), gelsolin-like | 8248 | -0.018 | -0.5041 | No |
| 20 | PPGB | PPGB Entrez, Source | protective protein for beta-galactosidase (galactosialidosis) | 8776 | -0.024 | -0.5359 | No |
| 21 | TSPAN6 | TSPAN6 Entrez, Source | tetraspanin 6 | 9780 | -0.035 | -0.5997 | No |
| 22 | CD99 | CD99 Entrez, Source | CD99 molecule | 9867 | -0.036 | -0.5942 | No |
| 23 | PLXNB2 | PLXNB2 Entrez, Source | plexin B2 | 9949 | -0.037 | -0.5880 | No |
| 24 | SLC1A4 | SLC1A4 Entrez, Source | solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 | 10292 | -0.041 | -0.6001 | No |
| 25 | PDLIM7 | PDLIM7 Entrez, Source | PDZ and LIM domain 7 (enigma) | 10511 | -0.044 | -0.6019 | Yes |
| 26 | GNB1 | GNB1 Entrez, Source | guanine nucleotide binding protein (G protein), beta polypeptide 1 | 10542 | -0.044 | -0.5895 | Yes |
| 27 | PRDX4 | PRDX4 Entrez, Source | peroxiredoxin 4 | 10666 | -0.046 | -0.5834 | Yes |
| 28 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 10678 | -0.046 | -0.5689 | Yes |
| 29 | MYH9 | MYH9 Entrez, Source | myosin, heavy chain 9, non-muscle | 10920 | -0.050 | -0.5703 | Yes |
| 30 | PLD3 | PLD3 Entrez, Source | phospholipase D family, member 3 | 10926 | -0.050 | -0.5540 | Yes |
| 31 | TES | TES Entrez, Source | testis derived transcript (3 LIM domains) | 10972 | -0.051 | -0.5404 | Yes |
| 32 | CAP1 | CAP1 Entrez, Source | CAP, adenylate cyclase-associated protein 1 (yeast) | 11031 | -0.051 | -0.5276 | Yes |
| 33 | TWIST2 | TWIST2 Entrez, Source | twist homolog 2 (Drosophila) | 11100 | -0.053 | -0.5150 | Yes |
| 34 | NQO2 | NQO2 Entrez, Source | NAD(P)H dehydrogenase, quinone 2 | 11205 | -0.055 | -0.5044 | Yes |
| 35 | FXYD5 | FXYD5 Entrez, Source | FXYD domain containing ion transport regulator 5 | 11354 | -0.058 | -0.4962 | Yes |
| 36 | SLC38A4 | SLC38A4 Entrez, Source | solute carrier family 38, member 4 | 11430 | -0.059 | -0.4820 | Yes |
| 37 | PGCP | PGCP Entrez, Source | - | 11724 | -0.065 | -0.4822 | Yes |
| 38 | DSTN | DSTN Entrez, Source | destrin (actin depolymerizing factor) | 11744 | -0.066 | -0.4616 | Yes |
| 39 | SERTAD1 | SERTAD1 Entrez, Source | SERTA domain containing 1 | 12268 | -0.082 | -0.4736 | Yes |
| 40 | ANXA5 | ANXA5 Entrez, Source | annexin A5 | 12733 | -0.105 | -0.4734 | Yes |
| 41 | ASAH1 | ASAH1 Entrez, Source | N-acylsphingosine amidohydrolase (acid ceramidase) 1 | 12784 | -0.110 | -0.4404 | Yes |
| 42 | F2R | F2R Entrez, Source | coagulation factor II (thrombin) receptor | 12839 | -0.114 | -0.4063 | Yes |
| 43 | TMSB10 | TMSB10 Entrez, Source | thymosin, beta 10 | 12891 | -0.120 | -0.3699 | Yes |
| 44 | LEPROT | LEPROT Entrez, Source | leptin receptor overlapping transcript | 12918 | -0.123 | -0.3307 | Yes |
| 45 | CD276 | CD276 Entrez, Source | CD276 molecule | 13057 | -0.141 | -0.2937 | Yes |
| 46 | MSN | MSN Entrez, Source | moesin | 13233 | -0.213 | -0.2355 | Yes |
| 47 | ANXA3 | ANXA3 Entrez, Source | annexin A3 | 13255 | -0.224 | -0.1620 | Yes |
| 48 | PRSS23 | PRSS23 Entrez, Source | protease, serine, 23 | 13336 | -0.503 | 0.0005 | Yes |
