Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | IDX_TSA_DN_CLUSTER4 |
| Enrichment Score (ES) | 0.51507545 |
| Normalized Enrichment Score (NES) | 1.5376289 |
| Nominal p-value | 0.036072146 |
| FDR q-value | 0.23818702 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HMGCS1 | HMGCS1 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | 36 | 0.229 | 0.1619 | Yes |
| 2 | SC4MOL | SC4MOL Entrez, Source | sterol-C4-methyl oxidase-like | 266 | 0.140 | 0.2452 | Yes |
| 3 | TMEM37 | TMEM37 Entrez, Source | transmembrane protein 37 | 471 | 0.120 | 0.3163 | Yes |
| 4 | SQLE | SQLE Entrez, Source | squalene epoxidase | 634 | 0.108 | 0.3818 | Yes |
| 5 | FDFT1 | FDFT1 Entrez, Source | farnesyl-diphosphate farnesyltransferase 1 | 952 | 0.094 | 0.4253 | Yes |
| 6 | SDPR | SDPR Entrez, Source | serum deprivation response (phosphatidylserine binding protein) | 1545 | 0.074 | 0.4338 | Yes |
| 7 | RAB3IL1 | RAB3IL1 Entrez, Source | RAB3A interacting protein (rabin3)-like 1 | 1671 | 0.071 | 0.4753 | Yes |
| 8 | FDPS | FDPS Entrez, Source | farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) | 1791 | 0.068 | 0.5151 | Yes |
| 9 | PYGB | PYGB Entrez, Source | phosphorylase, glycogen; brain | 3288 | 0.039 | 0.4306 | No |
| 10 | NSDHL | NSDHL Entrez, Source | NAD(P) dependent steroid dehydrogenase-like | 4607 | 0.021 | 0.3465 | No |
| 11 | ATP6V1C1 | ATP6V1C1 Entrez, Source | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 | 6343 | 0.001 | 0.2168 | No |
| 12 | ACADL | ACADL Entrez, Source | acyl-Coenzyme A dehydrogenase, long chain | 6542 | -0.001 | 0.2029 | No |
| 13 | UBE1C | UBE1C Entrez, Source | ubiquitin-activating enzyme E1C (UBA3 homolog, yeast) | 6831 | -0.004 | 0.1842 | No |
| 14 | ZFAND6 | ZFAND6 Entrez, Source | zinc finger, AN1-type domain 6 | 8147 | -0.017 | 0.0978 | No |
| 15 | MTM1 | MTM1 Entrez, Source | myotubularin 1 | 9464 | -0.031 | 0.0213 | No |
| 16 | ANXA6 | ANXA6 Entrez, Source | annexin A6 | 10067 | -0.038 | 0.0034 | No |
| 17 | DOCK9 | DOCK9 Entrez, Source | dedicator of cytokinesis 9 | 10296 | -0.041 | 0.0156 | No |
| 18 | STRBP | STRBP Entrez, Source | spermatid perinuclear RNA binding protein | 10585 | -0.045 | 0.0260 | No |
| 19 | PKP2 | PKP2 Entrez, Source | plakophilin 2 | 11683 | -0.064 | -0.0100 | No |
| 20 | GYG1 | GYG1 Entrez, Source | glycogenin 1 | 12237 | -0.081 | 0.0065 | No |
| 21 | FLOT1 | FLOT1 Entrez, Source | flotillin 1 | 12744 | -0.106 | 0.0449 | No |
