Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | IDX_TSA_DN_CLUSTER5 |
| Enrichment Score (ES) | -0.56136227 |
| Normalized Enrichment Score (NES) | -1.7308203 |
| Nominal p-value | 0.010183299 |
| FDR q-value | 0.1484467 |
| FWER p-Value | 0.998 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DDIT3 | DDIT3 Entrez, Source | DNA-damage-inducible transcript 3 | 356 | 0.129 | 0.0434 | No |
| 2 | SLC12A2 | SLC12A2 Entrez, Source | solute carrier family 12 (sodium/potassium/chloride transporters), member 2 | 1114 | 0.087 | 0.0337 | No |
| 3 | FNBP4 | FNBP4 Entrez, Source | formin binding protein 4 | 2154 | 0.059 | -0.0124 | No |
| 4 | CDH11 | CDH11 Entrez, Source | cadherin 11, type 2, OB-cadherin (osteoblast) | 2216 | 0.057 | 0.0141 | No |
| 5 | SHOX2 | SHOX2 Entrez, Source | short stature homeobox 2 | 3550 | 0.035 | -0.0672 | No |
| 6 | NR3C1 | NR3C1 Entrez, Source | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 4473 | 0.022 | -0.1243 | No |
| 7 | ATF1 | ATF1 Entrez, Source | activating transcription factor 1 | 5103 | 0.015 | -0.1635 | No |
| 8 | ACVR2A | ACVR2A Entrez, Source | activin A receptor, type IIA | 5957 | 0.005 | -0.2248 | No |
| 9 | ATF2 | ATF2 Entrez, Source | activating transcription factor 2 | 6021 | 0.004 | -0.2271 | No |
| 10 | RBM39 | RBM39 Entrez, Source | RNA binding motif protein 39 | 6107 | 0.004 | -0.2316 | No |
| 11 | RAB9 | RAB9 Entrez, Source | RAB9, member RAS oncogene family | 6803 | -0.004 | -0.2817 | No |
| 12 | ATP6AP2 | ATP6AP2 Entrez, Source | ATPase, H+ transporting, lysosomal accessory protein 2 | 7420 | -0.010 | -0.3227 | No |
| 13 | NFIX | NFIX Entrez, Source | nuclear factor I/X (CCAAT-binding transcription factor) | 7909 | -0.015 | -0.3514 | No |
| 14 | EDG2 | EDG2 Entrez, Source | endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 | 8571 | -0.022 | -0.3893 | No |
| 15 | SMARCA2 | SMARCA2 Entrez, Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 9559 | -0.032 | -0.4459 | No |
| 16 | FTS | FTS Entrez, Source | fused toes homolog (mouse) | 9805 | -0.035 | -0.4452 | No |
| 17 | RASA1 | RASA1 Entrez, Source | RAS p21 protein activator (GTPase activating protein) 1 | 11353 | -0.058 | -0.5299 | Yes |
| 18 | MARCKS | MARCKS Entrez, Source | myristoylated alanine-rich protein kinase C substrate | 11501 | -0.060 | -0.5081 | Yes |
| 19 | KIF5B | KIF5B Entrez, Source | kinesin family member 5B | 11786 | -0.067 | -0.4930 | Yes |
| 20 | SNAPAP | SNAPAP Entrez, Source | SNAP-associated protein | 11890 | -0.070 | -0.4628 | Yes |
| 21 | COL3A1 | COL3A1 Entrez, Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 12298 | -0.083 | -0.4484 | Yes |
| 22 | RBMS1 | RBMS1 Entrez, Source | RNA binding motif, single stranded interacting protein 1 | 12785 | -0.110 | -0.4252 | Yes |
| 23 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 12871 | -0.118 | -0.3673 | Yes |
| 24 | SMS | SMS Entrez, Source | spermine synthase | 12884 | -0.119 | -0.3032 | Yes |
| 25 | ALCAM | ALCAM Entrez, Source | activated leukocyte cell adhesion molecule | 13011 | -0.133 | -0.2403 | Yes |
| 26 | IRF1 | IRF1 Entrez, Source | interferon regulatory factor 1 | 13267 | -0.235 | -0.1315 | Yes |
| 27 | LMO7 | LMO7 Entrez, Source | LIM domain 7 | 13278 | -0.252 | 0.0048 | Yes |
