Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | IGF_VS_PDGF_DN |
| Enrichment Score (ES) | -0.50368536 |
| Normalized Enrichment Score (NES) | -1.5663764 |
| Nominal p-value | 0.029880479 |
| FDR q-value | 0.25476906 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | BHMT | BHMT Entrez, Source | betaine-homocysteine methyltransferase | 317 | 0.133 | 0.0523 | No |
| 2 | MGP | MGP Entrez, Source | matrix Gla protein | 1341 | 0.079 | 0.0206 | No |
| 3 | GREM1 | GREM1 Entrez, Source | gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) | 2434 | 0.053 | -0.0311 | No |
| 4 | CD53 | CD53 Entrez, Source | CD53 molecule | 2526 | 0.051 | -0.0087 | No |
| 5 | ATP1A3 | ATP1A3 Entrez, Source | ATPase, Na+/K+ transporting, alpha 3 polypeptide | 2560 | 0.050 | 0.0176 | No |
| 6 | ERRFI1 | ERRFI1 Entrez, Source | ERBB receptor feedback inhibitor 1 | 2825 | 0.046 | 0.0240 | No |
| 7 | CDKN2D | CDKN2D Entrez, Source | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) | 3370 | 0.037 | 0.0044 | No |
| 8 | DUSP4 | DUSP4 Entrez, Source | dual specificity phosphatase 4 | 3568 | 0.034 | 0.0092 | No |
| 9 | DUSP6 | DUSP6 Entrez, Source | dual specificity phosphatase 6 | 3699 | 0.033 | 0.0180 | No |
| 10 | PTGS1 | PTGS1 Entrez, Source | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) | 3760 | 0.032 | 0.0316 | No |
| 11 | SPAG5 | SPAG5 Entrez, Source | sperm associated antigen 5 | 4449 | 0.023 | -0.0071 | No |
| 12 | THBD | THBD Entrez, Source | thrombomodulin | 5742 | 0.007 | -0.0999 | No |
| 13 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 5860 | 0.006 | -0.1053 | No |
| 14 | PHEX | PHEX Entrez, Source | phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) | 6221 | 0.002 | -0.1311 | No |
| 15 | PRKG2 | PRKG2 Entrez, Source | protein kinase, cGMP-dependent, type II | 7321 | -0.009 | -0.2086 | No |
| 16 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 7976 | -0.015 | -0.2489 | No |
| 17 | CAPG | CAPG Entrez, Source | capping protein (actin filament), gelsolin-like | 8248 | -0.018 | -0.2588 | No |
| 18 | STOM | STOM Entrez, Source | stomatin | 11510 | -0.061 | -0.4691 | Yes |
| 19 | CRYL1 | CRYL1 Entrez, Source | crystallin, lambda 1 | 11907 | -0.070 | -0.4588 | Yes |
| 20 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 12415 | -0.087 | -0.4470 | Yes |
| 21 | F2R | F2R Entrez, Source | coagulation factor II (thrombin) receptor | 12839 | -0.114 | -0.4135 | Yes |
| 22 | DSCR1L1 | DSCR1L1 Entrez, Source | Down syndrome critical region gene 1-like 1 | 12846 | -0.115 | -0.3485 | Yes |
| 23 | CAV2 | CAV2 Entrez, Source | caveolin 2 | 13082 | -0.146 | -0.2826 | Yes |
| 24 | FBXO32 | FBXO32 Entrez, Source | F-box protein 32 | 13210 | -0.198 | -0.1790 | Yes |
| 25 | F3 | F3 Entrez, Source | coagulation factor III (thromboplastin, tissue factor) | 13312 | -0.331 | 0.0023 | Yes |
