Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | LINDSTEDT_DEND_UP |
| Enrichment Score (ES) | -0.47100493 |
| Normalized Enrichment Score (NES) | -1.497852 |
| Nominal p-value | 0.055913977 |
| FDR q-value | 0.2749502 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 789 | 0.100 | -0.0055 | No |
| 2 | KLF5 | KLF5 Entrez, Source | Kruppel-like factor 5 (intestinal) | 1027 | 0.091 | 0.0254 | No |
| 3 | CD80 | CD80 Entrez, Source | CD80 molecule | 1490 | 0.075 | 0.0309 | No |
| 4 | GADD45A | GADD45A Entrez, Source | growth arrest and DNA-damage-inducible, alpha | 1933 | 0.064 | 0.0321 | No |
| 5 | ADM | ADM Entrez, Source | adrenomedullin | 2189 | 0.058 | 0.0440 | No |
| 6 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 2339 | 0.055 | 0.0622 | No |
| 7 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 2506 | 0.051 | 0.0774 | No |
| 8 | DUSP4 | DUSP4 Entrez, Source | dual specificity phosphatase 4 | 3568 | 0.034 | 0.0161 | No |
| 9 | IL2RA | IL2RA Entrez, Source | interleukin 2 receptor, alpha | 4057 | 0.028 | -0.0057 | No |
| 10 | LAMP3 | LAMP3 Entrez, Source | lysosomal-associated membrane protein 3 | 6903 | -0.005 | -0.2169 | No |
| 11 | PLA2G6 | PLA2G6 Entrez, Source | phospholipase A2, group VI (cytosolic, calcium-independent) | 6933 | -0.005 | -0.2164 | No |
| 12 | PNRC1 | PNRC1 Entrez, Source | proline-rich nuclear receptor coactivator 1 | 7030 | -0.006 | -0.2205 | No |
| 13 | CXCR4 | CXCR4 Entrez, Source | chemokine (C-X-C motif) receptor 4 | 7175 | -0.007 | -0.2274 | No |
| 14 | NFKB1 | NFKB1 Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) | 7260 | -0.008 | -0.2293 | No |
| 15 | LAMB3 | LAMB3 Entrez, Source | laminin, beta 3 | 7845 | -0.014 | -0.2656 | No |
| 16 | NBN | NBN Entrez, Source | nibrin | 9071 | -0.027 | -0.3432 | No |
| 17 | OPTN | OPTN Entrez, Source | optineurin | 10558 | -0.044 | -0.4311 | No |
| 18 | SIAH2 | SIAH2 Entrez, Source | seven in absentia homolog 2 (Drosophila) | 11053 | -0.052 | -0.4404 | Yes |
| 19 | PSME2 | PSME2 Entrez, Source | proteasome (prosome, macropain) activator subunit 2 (PA28 beta) | 11462 | -0.060 | -0.4389 | Yes |
| 20 | MARCKS | MARCKS Entrez, Source | myristoylated alanine-rich protein kinase C substrate | 11501 | -0.060 | -0.4093 | Yes |
| 21 | TAP1 | TAP1 Entrez, Source | transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | 11710 | -0.065 | -0.3900 | Yes |
| 22 | CFLAR | CFLAR Entrez, Source | CASP8 and FADD-like apoptosis regulator | 11917 | -0.070 | -0.3678 | Yes |
| 23 | LYN | LYN Entrez, Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 12577 | -0.095 | -0.3660 | Yes |
| 24 | PDGFA | PDGFA Entrez, Source | platelet-derived growth factor alpha polypeptide | 12786 | -0.110 | -0.3226 | Yes |
| 25 | NFKB2 | NFKB2 Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) | 12794 | -0.110 | -0.2640 | Yes |
| 26 | NFKBIA | NFKBIA Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 12964 | -0.127 | -0.2083 | Yes |
| 27 | BIRC3 | BIRC3 Entrez, Source | baculoviral IAP repeat-containing 3 | 13071 | -0.143 | -0.1392 | Yes |
| 28 | ID2 | ID2 Entrez, Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 13084 | -0.146 | -0.0614 | Yes |
| 29 | MARCKSL1 | MARCKSL1 Entrez, Source | MARCKS-like 1 | 13105 | -0.150 | 0.0178 | Yes |
