Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | MYOD_BRG1_UP |
| Enrichment Score (ES) | -0.5410959 |
| Normalized Enrichment Score (NES) | -1.558517 |
| Nominal p-value | 0.04117647 |
| FDR q-value | 0.2514098 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MYBPH | MYBPH Entrez, Source | myosin binding protein H | 152 | 0.159 | 0.0690 | No |
| 2 | TNNT2 | TNNT2 Entrez, Source | troponin T type 2 (cardiac) | 441 | 0.122 | 0.1094 | No |
| 3 | CKM | CKM Entrez, Source | creatine kinase, muscle | 445 | 0.122 | 0.1709 | No |
| 4 | IGFBP5 | IGFBP5 Entrez, Source | insulin-like growth factor binding protein 5 | 892 | 0.096 | 0.1859 | No |
| 5 | ATP2A1 | ATP2A1 Entrez, Source | ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 | 1072 | 0.088 | 0.2173 | No |
| 6 | HRC | HRC Entrez, Source | histidine rich calcium binding protein | 1083 | 0.088 | 0.2611 | No |
| 7 | TNNI2 | TNNI2 Entrez, Source | troponin I type 2 (skeletal, fast) | 2401 | 0.054 | 0.1895 | No |
| 8 | TNNT3 | TNNT3 Entrez, Source | troponin T type 3 (skeletal, fast) | 3949 | 0.029 | 0.0882 | No |
| 9 | VKORC1 | VKORC1 Entrez, Source | vitamin K epoxide reductase complex, subunit 1 | 4247 | 0.025 | 0.0787 | No |
| 10 | MYOG | MYOG Entrez, Source | myogenin (myogenic factor 4) | 4784 | 0.019 | 0.0479 | No |
| 11 | KIFC3 | KIFC3 Entrez, Source | kinesin family member C3 | 5345 | 0.012 | 0.0120 | No |
| 12 | PPFIA4 | PPFIA4 Entrez, Source | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 | 5649 | 0.009 | -0.0064 | No |
| 13 | PDLIM3 | PDLIM3 Entrez, Source | PDZ and LIM domain 3 | 6622 | -0.002 | -0.0783 | No |
| 14 | MYH3 | MYH3 Entrez, Source | myosin, heavy chain 3, skeletal muscle, embryonic | 7568 | -0.011 | -0.1435 | No |
| 15 | BIN1 | BIN1 Entrez, Source | bridging integrator 1 | 7729 | -0.013 | -0.1491 | No |
| 16 | ENO3 | ENO3 Entrez, Source | enolase 3 (beta, muscle) | 9845 | -0.036 | -0.2898 | No |
| 17 | SCHIP1 | SCHIP1 Entrez, Source | schwannomin interacting protein 1 | 13195 | -0.185 | -0.4473 | Yes |
| 18 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 13342 | -0.905 | -0.0000 | Yes |
