Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | SHEPARD_BMYB_MORPHOLINO_UP |
| Enrichment Score (ES) | 0.35349593 |
| Normalized Enrichment Score (NES) | 1.4396003 |
| Nominal p-value | 0.030710172 |
| FDR q-value | 0.30176017 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HSPB1 | HSPB1 Entrez, Source | heat shock 27kDa protein 1 | 5 | 0.389 | 0.0709 | Yes |
| 2 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 11 | 0.331 | 0.1313 | Yes |
| 3 | PCK1 | PCK1 Entrez, Source | phosphoenolpyruvate carboxykinase 1 (soluble) | 59 | 0.201 | 0.1646 | Yes |
| 4 | FABP1 | FABP1 Entrez, Source | fatty acid binding protein 1, liver | 63 | 0.197 | 0.2004 | Yes |
| 5 | ARG1 | ARG1 Entrez, Source | arginase, liver | 217 | 0.146 | 0.2157 | Yes |
| 6 | UPB1 | UPB1 Entrez, Source | ureidopropionase, beta | 300 | 0.135 | 0.2342 | Yes |
| 7 | BGN | BGN Entrez, Source | biglycan | 305 | 0.135 | 0.2586 | Yes |
| 8 | FST | FST Entrez, Source | follistatin | 503 | 0.117 | 0.2652 | Yes |
| 9 | MMP2 | MMP2 Entrez, Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 527 | 0.115 | 0.2846 | Yes |
| 10 | BMP2 | BMP2 Entrez, Source | bone morphogenetic protein 2 | 547 | 0.114 | 0.3040 | Yes |
| 11 | SLC16A6 | SLC16A6 Entrez, Source | solute carrier family 16, member 6 (monocarboxylic acid transporter 7) | 674 | 0.105 | 0.3138 | Yes |
| 12 | WNT11 | WNT11 Entrez, Source | wingless-type MMTV integration site family, member 11 | 860 | 0.097 | 0.3176 | Yes |
| 13 | GMPR | GMPR Entrez, Source | guanosine monophosphate reductase | 1012 | 0.091 | 0.3229 | Yes |
| 14 | HSD3B1 | HSD3B1 Entrez, Source | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 | 1022 | 0.091 | 0.3388 | Yes |
| 15 | NAPE-PLD | NAPE-PLD Entrez, Source | - | 1248 | 0.082 | 0.3369 | Yes |
| 16 | HNF4A | HNF4A Entrez, Source | hepatocyte nuclear factor 4, alpha | 1439 | 0.077 | 0.3366 | Yes |
| 17 | HMGA1 | HMGA1 Entrez, Source | high mobility group AT-hook 1 | 1440 | 0.077 | 0.3506 | Yes |
| 18 | CYP26B1 | CYP26B1 Entrez, Source | cytochrome P450, family 26, subfamily B, polypeptide 1 | 1580 | 0.073 | 0.3535 | Yes |
| 19 | CYP11A1 | CYP11A1 Entrez, Source | cytochrome P450, family 11, subfamily A, polypeptide 1 | 2097 | 0.060 | 0.3256 | No |
| 20 | HPGD | HPGD Entrez, Source | hydroxyprostaglandin dehydrogenase 15-(NAD) | 2110 | 0.060 | 0.3356 | No |
| 21 | SOCS3 | SOCS3 Entrez, Source | suppressor of cytokine signaling 3 | 2264 | 0.056 | 0.3343 | No |
| 22 | HNRPD | HNRPD Entrez, Source | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | 2376 | 0.054 | 0.3359 | No |
| 23 | GLUD1 | GLUD1 Entrez, Source | glutamate dehydrogenase 1 | 2709 | 0.048 | 0.3196 | No |
| 24 | SQSTM1 | SQSTM1 Entrez, Source | sequestosome 1 | 2801 | 0.046 | 0.3212 | No |
| 25 | CAMK1G | CAMK1G Entrez, Source | calcium/calmodulin-dependent protein kinase IG | 2838 | 0.046 | 0.3268 | No |
| 26 | IGF2 | IGF2 Entrez, Source | insulin-like growth factor 2 (somatomedin A) | 2858 | 0.045 | 0.3337 | No |
| 27 | TIMP2 | TIMP2 Entrez, Source | TIMP metallopeptidase inhibitor 2 | 3227 | 0.040 | 0.3132 | No |
| 28 | HFE | HFE Entrez, Source | hemochromatosis | 3648 | 0.033 | 0.2875 | No |
| 29 | ATP6V1C2 | ATP6V1C2 Entrez, Source | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 | 3790 | 0.031 | 0.2826 | No |
| 30 | STIP1 | STIP1 Entrez, Source | stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) | 3797 | 0.031 | 0.2879 | No |
| 31 | PTPRN | PTPRN Entrez, Source | protein tyrosine phosphatase, receptor type, N | 3909 | 0.030 | 0.2849 | No |
| 32 | LAMP2 | LAMP2 Entrez, Source | lysosomal-associated membrane protein 2 | 4416 | 0.023 | 0.2510 | No |
| 33 | EIF4E | EIF4E Entrez, Source | eukaryotic translation initiation factor 4E | 4511 | 0.022 | 0.2479 | No |
| 34 | GPC4 | GPC4 Entrez, Source | glypican 4 | 4613 | 0.021 | 0.2440 | No |
| 35 | PNPO | PNPO Entrez, Source | pyridoxamine 5'-phosphate oxidase | 4621 | 0.020 | 0.2472 | No |
| 36 | CUBN | CUBN Entrez, Source | cubilin (intrinsic factor-cobalamin receptor) | 4682 | 0.020 | 0.2463 | No |
| 37 | CPN1 | CPN1 Entrez, Source | carboxypeptidase N, polypeptide 1, 50kD | 5099 | 0.015 | 0.2177 | No |
| 38 | SSB | SSB Entrez, Source | Sjogren syndrome antigen B (autoantigen La) | 5599 | 0.009 | 0.1817 | No |
| 39 | ITM2B | ITM2B Entrez, Source | integral membrane protein 2B | 6118 | 0.003 | 0.1432 | No |
| 40 | RPS27 | RPS27 Entrez, Source | ribosomal protein S27 (metallopanstimulin 1) | 6230 | 0.002 | 0.1352 | No |
| 41 | CCNG1 | CCNG1 Entrez, Source | cyclin G1 | 6322 | 0.001 | 0.1285 | No |
| 42 | DNAJA2 | DNAJA2 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 2 | 6495 | -0.001 | 0.1157 | No |
| 43 | TP53 | TP53 Entrez, Source | tumor protein p53 (Li-Fraumeni syndrome) | 6874 | -0.004 | 0.0880 | No |
| 44 | B2M | B2M Entrez, Source | beta-2-microglobulin | 6897 | -0.005 | 0.0871 | No |
| 45 | GCSH | GCSH Entrez, Source | glycine cleavage system protein H (aminomethyl carrier) | 6899 | -0.005 | 0.0879 | No |
| 46 | GNAI3 | GNAI3 Entrez, Source | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 | 6944 | -0.005 | 0.0855 | No |
| 47 | MRPS18B | MRPS18B Entrez, Source | mitochondrial ribosomal protein S18B | 7041 | -0.006 | 0.0794 | No |
| 48 | HSPA2 | HSPA2 Entrez, Source | heat shock 70kDa protein 2 | 7468 | -0.010 | 0.0491 | No |
| 49 | PAPOLB | PAPOLB Entrez, Source | poly(A) polymerase beta (testis specific) | 7586 | -0.011 | 0.0423 | No |
| 50 | PRDX1 | PRDX1 Entrez, Source | peroxiredoxin 1 | 7611 | -0.012 | 0.0427 | No |
| 51 | PLAA | PLAA Entrez, Source | phospholipase A2-activating protein | 7648 | -0.012 | 0.0421 | No |
| 52 | SND1 | SND1 Entrez, Source | - | 7653 | -0.012 | 0.0441 | No |
| 53 | BAX | BAX Entrez, Source | BCL2-associated X protein | 7784 | -0.013 | 0.0367 | No |
| 54 | VDAC3 | VDAC3 Entrez, Source | voltage-dependent anion channel 3 | 7808 | -0.014 | 0.0375 | No |
| 55 | RDH10 | RDH10 Entrez, Source | retinol dehydrogenase 10 (all-trans) | 7839 | -0.014 | 0.0378 | No |
| 56 | NUDT9 | NUDT9 Entrez, Source | nudix (nucleoside diphosphate linked moiety X)-type motif 9 | 8008 | -0.016 | 0.0280 | No |
| 57 | ABCC5 | ABCC5 Entrez, Source | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 | 8737 | -0.023 | -0.0227 | No |
| 58 | ABAT | ABAT Entrez, Source | 4-aminobutyrate aminotransferase | 8902 | -0.025 | -0.0305 | No |
| 59 | SLC31A1 | SLC31A1 Entrez, Source | solute carrier family 31 (copper transporters), member 1 | 8908 | -0.025 | -0.0263 | No |
| 60 | SYBL1 | SYBL1 Entrez, Source | synaptobrevin-like 1 | 8932 | -0.025 | -0.0234 | No |
| 61 | BNIP3L | BNIP3L Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 9084 | -0.027 | -0.0299 | No |
| 62 | DNAJA3 | DNAJA3 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 3 | 9342 | -0.029 | -0.0439 | No |
| 63 | PDC | PDC Entrez, Source | phosducin | 9436 | -0.031 | -0.0453 | No |
| 64 | WHSC2 | WHSC2 Entrez, Source | Wolf-Hirschhorn syndrome candidate 2 | 9443 | -0.031 | -0.0401 | No |
| 65 | KNS2 | KNS2 Entrez, Source | kinesin 2 | 9501 | -0.031 | -0.0386 | No |
| 66 | FNTB | FNTB Entrez, Source | farnesyltransferase, CAAX box, beta | 9531 | -0.032 | -0.0350 | No |
| 67 | HSBP1 | HSBP1 Entrez, Source | heat shock factor binding protein 1 | 9721 | -0.034 | -0.0430 | No |
| 68 | PSMD3 | PSMD3 Entrez, Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 | 9942 | -0.037 | -0.0529 | No |
| 69 | PSME1 | PSME1 Entrez, Source | proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) | 10072 | -0.038 | -0.0557 | No |
| 70 | PTP4A2 | PTP4A2 Entrez, Source | protein tyrosine phosphatase type IVA, member 2 | 10102 | -0.038 | -0.0508 | No |
| 71 | QKI | QKI Entrez, Source | quaking homolog, KH domain RNA binding (mouse) | 10287 | -0.041 | -0.0573 | No |
| 72 | ATP1A1 | ATP1A1 Entrez, Source | ATPase, Na+/K+ transporting, alpha 1 polypeptide | 10291 | -0.041 | -0.0501 | No |
| 73 | CASP8 | CASP8 Entrez, Source | caspase 8, apoptosis-related cysteine peptidase | 10368 | -0.041 | -0.0482 | No |
| 74 | MBP | MBP Entrez, Source | myelin basic protein | 10406 | -0.042 | -0.0433 | No |
| 75 | OSGEPL1 | OSGEPL1 Entrez, Source | O-sialoglycoprotein endopeptidase-like 1 | 10579 | -0.044 | -0.0481 | No |
| 76 | EFHD2 | EFHD2 Entrez, Source | EF-hand domain family, member D2 | 10588 | -0.045 | -0.0406 | No |
| 77 | IFI30 | IFI30 Entrez, Source | interferon, gamma-inducible protein 30 | 10707 | -0.046 | -0.0410 | No |
| 78 | GNS | GNS Entrez, Source | glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) | 10834 | -0.049 | -0.0416 | No |
| 79 | ANXA2 | ANXA2 Entrez, Source | annexin A2 | 10835 | -0.049 | -0.0326 | No |
| 80 | RASL11B | RASL11B Entrez, Source | RAS-like, family 11, member B | 11001 | -0.051 | -0.0357 | No |
| 81 | SNX27 | SNX27 Entrez, Source | sorting nexin family member 27 | 11154 | -0.054 | -0.0373 | No |
| 82 | CRABP2 | CRABP2 Entrez, Source | cellular retinoic acid binding protein 2 | 11193 | -0.055 | -0.0302 | No |
| 83 | DLGAP4 | DLGAP4 Entrez, Source | discs, large (Drosophila) homolog-associated protein 4 | 11287 | -0.057 | -0.0268 | No |
| 84 | AK3 | AK3 Entrez, Source | adenylate kinase 3 | 11525 | -0.061 | -0.0335 | No |
| 85 | SCARB1 | SCARB1 Entrez, Source | scavenger receptor class B, member 1 | 11542 | -0.061 | -0.0235 | No |
| 86 | MINA | MINA Entrez, Source | MYC induced nuclear antigen | 11949 | -0.071 | -0.0411 | No |
| 87 | MRPL19 | MRPL19 Entrez, Source | mitochondrial ribosomal protein L19 | 12043 | -0.074 | -0.0345 | No |
| 88 | TPD52L2 | TPD52L2 Entrez, Source | tumor protein D52-like 2 | 12160 | -0.078 | -0.0290 | No |
| 89 | SH3GLB2 | SH3GLB2 Entrez, Source | SH3-domain GRB2-like endophilin B2 | 12311 | -0.083 | -0.0250 | No |
| 90 | TMPO | TMPO Entrez, Source | thymopoietin | 12812 | -0.111 | -0.0424 | No |
| 91 | RAB3C | RAB3C Entrez, Source | RAB3C, member RAS oncogene family | 12925 | -0.124 | -0.0281 | No |
| 92 | DNAJB4 | DNAJB4 Entrez, Source | DnaJ (Hsp40) homolog, subfamily B, member 4 | 12953 | -0.126 | -0.0070 | No |
| 93 | FBXO32 | FBXO32 Entrez, Source | F-box protein 32 | 13210 | -0.198 | 0.0100 | No |
