Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | SPECIFIC_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY |
| Enrichment Score (ES) | 0.615882 |
| Normalized Enrichment Score (NES) | 1.6932069 |
| Nominal p-value | 0.017142856 |
| FDR q-value | 0.1349511 |
| FWER p-Value | 0.999 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 11 | 0.331 | 0.3682 | Yes |
| 2 | NR2F1 | NR2F1 Entrez, Source | nuclear receptor subfamily 2, group F, member 1 | 41 | 0.224 | 0.6159 | Yes |
| 3 | NR0B1 | NR0B1 Entrez, Source | nuclear receptor subfamily 0, group B, member 1 | 3167 | 0.041 | 0.4268 | No |
| 4 | ATF4 | ATF4 Entrez, Source | activating transcription factor 4 (tax-responsive enhancer element B67) | 3467 | 0.036 | 0.4440 | No |
| 5 | NOTCH2 | NOTCH2 Entrez, Source | Notch homolog 2 (Drosophila) | 4379 | 0.023 | 0.4018 | No |
| 6 | SOX9 | SOX9 Entrez, Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 4534 | 0.021 | 0.4141 | No |
| 7 | IRF7 | IRF7 Entrez, Source | interferon regulatory factor 7 | 4680 | 0.020 | 0.4253 | No |
| 8 | PKNOX1 | PKNOX1 Entrez, Source | PBX/knotted 1 homeobox 1 | 4698 | 0.020 | 0.4458 | No |
| 9 | RXRB | RXRB Entrez, Source | retinoid X receptor, beta | 4872 | 0.018 | 0.4526 | No |
| 10 | BRD8 | BRD8 Entrez, Source | bromodomain containing 8 | 5377 | 0.012 | 0.4277 | No |
| 11 | RXRA | RXRA Entrez, Source | retinoid X receptor, alpha | 5744 | 0.007 | 0.4084 | No |
| 12 | ZNF148 | ZNF148 Entrez, Source | zinc finger protein 148 | 6724 | -0.003 | 0.3384 | No |
| 13 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 7287 | -0.009 | 0.3057 | No |
| 14 | USF1 | USF1 Entrez, Source | upstream transcription factor 1 | 11219 | -0.055 | 0.0724 | No |
| 15 | DEK | DEK Entrez, Source | DEK oncogene (DNA binding) | 12158 | -0.078 | 0.0888 | No |
