Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | single_gel_24h |
| GeneSet | V$HOX13_01 |
| Enrichment Score (ES) | -0.52307767 |
| Normalized Enrichment Score (NES) | -1.5727717 |
| Nominal p-value | 0.02330097 |
| FDR q-value | 0.25583112 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | NTF3 | NTF3 Entrez, Source | neurotrophin 3 | 1291 | 0.081 | -0.0461 | No |
| 2 | CASKIN1 | CASKIN1 Entrez, Source | CASK interacting protein 1 | 1599 | 0.072 | -0.0234 | No |
| 3 | KCNH3 | KCNH3 Entrez, Source | potassium voltage-gated channel, subfamily H (eag-related), member 3 | 2561 | 0.050 | -0.0636 | No |
| 4 | LMO4 | LMO4 Entrez, Source | LIM domain only 4 | 2834 | 0.046 | -0.0553 | No |
| 5 | PDE2A | PDE2A Entrez, Source | phosphodiesterase 2A, cGMP-stimulated | 2846 | 0.045 | -0.0274 | No |
| 6 | IGF1 | IGF1 Entrez, Source | insulin-like growth factor 1 (somatomedin C) | 4287 | 0.025 | -0.1198 | No |
| 7 | SON | SON Entrez, Source | SON DNA binding protein | 7838 | -0.014 | -0.3775 | No |
| 8 | PRRX1 | PRRX1 Entrez, Source | paired related homeobox 1 | 8277 | -0.019 | -0.3987 | No |
| 9 | PCTK1 | PCTK1 Entrez, Source | PCTAIRE protein kinase 1 | 9935 | -0.036 | -0.5001 | Yes |
| 10 | NDFIP1 | NDFIP1 Entrez, Source | Nedd4 family interacting protein 1 | 10002 | -0.037 | -0.4815 | Yes |
| 11 | TRPV6 | TRPV6 Entrez, Source | transient receptor potential cation channel, subfamily V, member 6 | 10024 | -0.037 | -0.4595 | Yes |
| 12 | UNC5C | UNC5C Entrez, Source | unc-5 homolog C (C. elegans) | 10079 | -0.038 | -0.4394 | Yes |
| 13 | NEO1 | NEO1 Entrez, Source | neogenin homolog 1 (chicken) | 10277 | -0.040 | -0.4287 | Yes |
| 14 | FOXA1 | FOXA1 Entrez, Source | forkhead box A1 | 10364 | -0.041 | -0.4090 | Yes |
| 15 | SMOC1 | SMOC1 Entrez, Source | SPARC related modular calcium binding 1 | 10655 | -0.046 | -0.4020 | Yes |
| 16 | PPP2R2B | PPP2R2B Entrez, Source | protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform | 10989 | -0.051 | -0.3949 | Yes |
| 17 | UNC5B | UNC5B Entrez, Source | unc-5 homolog B (C. elegans) | 11046 | -0.052 | -0.3664 | Yes |
| 18 | CALD1 | CALD1 Entrez, Source | caldesmon 1 | 12565 | -0.095 | -0.4206 | Yes |
| 19 | FBXO11 | FBXO11 Entrez, Source | F-box protein 11 | 12776 | -0.109 | -0.3676 | Yes |
| 20 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 13302 | -0.295 | -0.2208 | Yes |
| 21 | GNAI1 | GNAI1 Entrez, Source | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 | 13318 | -0.354 | 0.0018 | Yes |
