Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_24h_versus_single_gel_24h.class.cls
#double_gel_24h_versus_single_gel_24h_repos
Phenotypeclass.cls#double_gel_24h_versus_single_gel_24h_repos
Upregulated in classdouble_gel_24h
GeneSetV$MEF2_01
Enrichment Score (ES)0.4489931
Normalized Enrichment Score (NES)1.6959867
Nominal p-value0.001980198
FDR q-value0.13380052
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$MEF2_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FOSFOS
Entrez,  Source
v-fos FBJ murine osteosarcoma viral oncogene homolog110.3310.0904Yes
2MAS1MAS1
Entrez,  Source
MAS1 oncogene2010.1490.1172Yes
3CACNA2D3CACNA2D3
Entrez,  Source
calcium channel, voltage-dependent, alpha 2/delta 3 subunit4200.1240.1348Yes
4CKMCKM
Entrez,  Source
creatine kinase, muscle4450.1220.1666Yes
5KCNK9KCNK9
Entrez,  Source
potassium channel, subfamily K, member 97590.1010.1710Yes
6IGJIGJ
Entrez,  Source
immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides7640.1010.1986Yes
7MSX2MSX2
Entrez,  Source
msh homeobox homolog 2 (Drosophila)9810.0920.2077Yes
8CASQ2CASQ2
Entrez,  Source
calsequestrin 2 (cardiac muscle)10920.0870.2234Yes
9KIAA1446KIAA1446
Entrez,  Source
-11690.0850.2411Yes
10DMP1DMP1
Entrez,  Source
dentin matrix acidic phosphoprotein12960.0800.2537Yes
11CENTB2CENTB2
Entrez,  Source
centaurin, beta 213350.0790.2726Yes
12HAS2HAS2
Entrez,  Source
hyaluronan synthase 213430.0790.2938Yes
13EPHB1EPHB1
Entrez,  Source
EPH receptor B113870.0780.3121Yes
14ANK3ANK3
Entrez,  Source
ankyrin 3, node of Ranvier (ankyrin G)14410.0770.3291Yes
15TNNI3KTNNI3K
Entrez,  Source
TNNI3 interacting kinase15330.0740.3426Yes
16CDC25BCDC25B
Entrez,  Source
cell division cycle 25B16090.0720.3568Yes
17TRDNTRDN
Entrez,  Source
triadin16680.0710.3719Yes
18HAPLN1HAPLN1
Entrez,  Source
hyaluronan and proteoglycan link protein 116820.0700.3903Yes
19SLC12A5SLC12A5
Entrez,  Source
solute carrier family 12, (potassium-chloride transporter) member 518990.0650.3919Yes
20FGF6FGF6
Entrez,  Source
fibroblast growth factor 619810.0630.4032Yes
21GRAP2GRAP2
Entrez,  Source
GRB2-related adaptor protein 220540.0610.4146Yes
22CNGA1CNGA1
Entrez,  Source
cyclic nucleotide gated channel alpha 123650.0540.4062Yes
23EDG1EDG1
Entrez,  Source
endothelial differentiation, sphingolipid G-protein-coupled receptor, 124630.0520.4133Yes
24RIMS2RIMS2
Entrez,  Source
regulating synaptic membrane exocytosis 224950.0520.4251Yes
25MYO9AMYO9A
Entrez,  Source
myosin IXA26870.0480.4240Yes
26PDGFRAPDGFRA
Entrez,  Source
platelet-derived growth factor receptor, alpha polypeptide28440.0450.4248Yes
27JPH2JPH2
Entrez,  Source
junctophilin 229580.0440.4283Yes
28ARL6IP2ARL6IP2
Entrez,  Source
ADP-ribosylation factor-like 6 interacting protein 229950.0430.4374Yes
29KCNJ9KCNJ9
Entrez,  Source
potassium inwardly-rectifying channel, subfamily J, member 931680.0410.4357Yes
30TIMP2TIMP2
Entrez,  Source
TIMP metallopeptidase inhibitor 232270.0400.4422Yes
31SMPXSMPX
Entrez,  Source
small muscle protein, X-linked32800.0390.4490Yes
32TNNC1TNNC1
Entrez,  Source
troponin C type 1 (slow)38350.0310.4157No
33SYT10SYT10
Entrez,  Source
synaptotagmin X38470.0300.4232No
34ITGA7ITGA7
Entrez,  Source
integrin, alpha 738670.0300.4301No
35GRIK1GRIK1
Entrez,  Source
glutamate receptor, ionotropic, kainate 141700.0260.4145No
36GPC4GPC4
Entrez,  Source
glypican 446130.0210.3869No
37MYH6MYH6
Entrez,  Source
myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)46700.0200.3881No
38DPYSL3DPYSL3
Entrez,  Source
dihydropyrimidinase-like 348150.0180.3823No
39JUNJUN
Entrez,  Source
jun oncogene48410.0180.3854No
40ESRRGESRRG
Entrez,  Source
estrogen-related receptor gamma49420.0170.3825No
41WFDC1WFDC1
Entrez,  Source
WAP four-disulfide core domain 150130.0160.3816No
42AKAP12AKAP12
Entrez,  Source
A kinase (PRKA) anchor protein (gravin) 1253030.0130.3633No
43KCNN1KCNN1
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 155310.0100.3489No
44ASCL2ASCL2
Entrez,  Source
achaete-scute complex-like 2 (Drosophila)56330.0090.3437No
45FGF12FGF12
Entrez,  Source
fibroblast growth factor 1257710.0070.3354No
46CSPG3CSPG3
Entrez,  Source
chondroitin sulfate proteoglycan 3 (neurocan)61230.0030.3099No
47IL17BIL17B
Entrez,  Source
interleukin 17B7271-0.0080.2258No
48SMAD1SMAD1
Entrez,  Source
SMAD, mothers against DPP homolog 1 (Drosophila)7489-0.0100.2123No
49NFIXNFIX
Entrez,  Source
nuclear factor I/X (CCAAT-binding transcription factor)7909-0.0150.1848No
50ELMO3ELMO3
Entrez,  Source
engulfment and cell motility 38102-0.0170.1749No
51TSC1TSC1
Entrez,  Source
tuberous sclerosis 18579-0.0220.1450No
52ITGB6ITGB6
Entrez,  Source
integrin, beta 68714-0.0230.1413No
53GATA4GATA4
Entrez,  Source
GATA binding protein 48719-0.0230.1473No
54PRKAG1PRKAG1
Entrez,  Source
protein kinase, AMP-activated, gamma 1 non-catalytic subunit8770-0.0230.1500No
55BMP7BMP7
Entrez,  Source
bone morphogenetic protein 7 (osteogenic protein 1)9066-0.0270.1351No
56SMARCA2SMARCA2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 29559-0.0320.1069No
57MYL2MYL2
Entrez,  Source
myosin, light chain 2, regulatory, cardiac, slow9897-0.0360.0915No
58CAPN1CAPN1
Entrez,  Source
calpain 1, (mu/I) large subunit10030-0.0370.0919No
59LUZP1LUZP1
Entrez,  Source
leucine zipper protein 110184-0.0390.0912No
60ITGB3BPITGB3BP
Entrez,  Source
integrin beta 3 binding protein (beta3-endonexin)10308-0.0410.0931No
61ANP32AANP32A
Entrez,  Source
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A11774-0.0670.0012No
62SLC7A9SLC7A9
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 912083-0.075-0.0013No
63GNASGNAS
Entrez,  Source
GNAS complex locus12462-0.089-0.0051No
64LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog12577-0.0950.0126No
65AKAP13AKAP13
Entrez,  Source
A kinase (PRKA) anchor protein 1313154-0.1630.0142No
Table: GSEA details [plain text format]



Fig 2: V$MEF2_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$MEF2_01: Random ES distribution   
Gene set null distribution of ES for V$MEF2_01