Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_24h_versus_single_gel_24h.class.cls #double_gel_24h_versus_single_gel_24h_repos |
| Phenotype | class.cls#double_gel_24h_versus_single_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | VEGF_HUVEC_30MIN_UP |
| Enrichment Score (ES) | 0.5335659 |
| Normalized Enrichment Score (NES) | 1.5017612 |
| Nominal p-value | 0.057312254 |
| FDR q-value | 0.26825014 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 10 | 0.347 | 0.2621 | Yes |
| 2 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 35 | 0.229 | 0.4338 | Yes |
| 3 | DUSP5 | DUSP5 Entrez, Source | dual specificity phosphatase 5 | 206 | 0.148 | 0.5336 | Yes |
| 4 | TAC1 | TAC1 Entrez, Source | tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) | 1171 | 0.085 | 0.5255 | No |
| 5 | PPY | PPY Entrez, Source | pancreatic polypeptide | 2375 | 0.054 | 0.4763 | No |
| 6 | EGR3 | EGR3 Entrez, Source | early growth response 3 | 3724 | 0.032 | 0.3995 | No |
| 7 | NR4A1 | NR4A1 Entrez, Source | nuclear receptor subfamily 4, group A, member 1 | 4037 | 0.028 | 0.3972 | No |
| 8 | TRIB1 | TRIB1 Entrez, Source | tribbles homolog 1 (Drosophila) | 5150 | 0.014 | 0.3246 | No |
| 9 | GZMK | GZMK Entrez, Source | granzyme K (granzyme 3; tryptase II) | 5359 | 0.012 | 0.3180 | No |
| 10 | DBC1 | DBC1 Entrez, Source | deleted in bladder cancer 1 | 5374 | 0.012 | 0.3257 | No |
| 11 | ALAD | ALAD Entrez, Source | aminolevulinate, delta-, dehydratase | 5837 | 0.006 | 0.2958 | No |
| 12 | APOE | APOE Entrez, Source | apolipoprotein E | 7282 | -0.008 | 0.1938 | No |
| 13 | C2 | C2 Entrez, Source | complement component 2 | 8163 | -0.017 | 0.1409 | No |
| 14 | DSCR1 | DSCR1 Entrez, Source | Down syndrome critical region gene 1 | 8894 | -0.025 | 0.1050 | No |
| 15 | HDC | HDC Entrez, Source | histidine decarboxylase | 10155 | -0.039 | 0.0400 | No |
| 16 | CYR61 | CYR61 Entrez, Source | cysteine-rich, angiogenic inducer, 61 | 10367 | -0.041 | 0.0555 | No |
| 17 | SCRN1 | SCRN1 Entrez, Source | secernin 1 | 12790 | -0.110 | -0.0429 | No |
| 18 | VARS | VARS Entrez, Source | valyl-tRNA synthetase | 12808 | -0.111 | 0.0401 | No |
