Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | BASSO_HCL_DIFF |
| Enrichment Score (ES) | -0.5246095 |
| Normalized Enrichment Score (NES) | -1.6901621 |
| Nominal p-value | 0.006722689 |
| FDR q-value | 0.071586534 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MYF6 | MYF6 Entrez, Source | myogenic factor 6 (herculin) | 205 | 0.172 | 0.0224 | No |
| 2 | DPYD | DPYD Entrez, Source | dihydropyrimidine dehydrogenase | 745 | 0.109 | 0.0058 | No |
| 3 | FGFR1 | FGFR1 Entrez, Source | fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) | 873 | 0.104 | 0.0191 | No |
| 4 | DLC1 | DLC1 Entrez, Source | deleted in liver cancer 1 | 960 | 0.099 | 0.0344 | No |
| 5 | GAS7 | GAS7 Entrez, Source | growth arrest-specific 7 | 1180 | 0.090 | 0.0378 | No |
| 6 | TBKBP1 | TBKBP1 Entrez, Source | TBK1 binding protein 1 | 1252 | 0.088 | 0.0517 | No |
| 7 | RCBTB2 | RCBTB2 Entrez, Source | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 | 1368 | 0.083 | 0.0614 | No |
| 8 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 2407 | 0.060 | -0.0034 | No |
| 9 | HBB | HBB Entrez, Source | hemoglobin, beta | 2529 | 0.058 | 0.0002 | No |
| 10 | TNFRSF1A | TNFRSF1A Entrez, Source | tumor necrosis factor receptor superfamily, member 1A | 2994 | 0.050 | -0.0237 | No |
| 11 | SDC3 | SDC3 Entrez, Source | syndecan 3 (N-syndecan) | 3314 | 0.046 | -0.0376 | No |
| 12 | AIF1 | AIF1 Entrez, Source | allograft inflammatory factor 1 | 3679 | 0.041 | -0.0561 | No |
| 13 | BLR1 | BLR1 Entrez, Source | Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) | 3801 | 0.039 | -0.0565 | No |
| 14 | ENG | ENG Entrez, Source | endoglin (Osler-Rendu-Weber syndrome 1) | 4137 | 0.035 | -0.0741 | No |
| 15 | TACC1 | TACC1 Entrez, Source | transforming, acidic coiled-coil containing protein 1 | 5137 | 0.022 | -0.1444 | No |
| 16 | PDE4DIP | PDE4DIP Entrez, Source | phosphodiesterase 4D interacting protein (myomegalin) | 5401 | 0.019 | -0.1599 | No |
| 17 | RPLP1 | RPLP1 Entrez, Source | ribosomal protein, large, P1 | 5555 | 0.018 | -0.1675 | No |
| 18 | NOVA1 | NOVA1 Entrez, Source | neuro-oncological ventral antigen 1 | 6138 | 0.012 | -0.2087 | No |
| 19 | SIX3 | SIX3 Entrez, Source | sine oculis homeobox homolog 3 (Drosophila) | 6344 | 0.009 | -0.2221 | No |
| 20 | RTN2 | RTN2 Entrez, Source | reticulon 2 | 6437 | 0.008 | -0.2273 | No |
| 21 | MAPK10 | MAPK10 Entrez, Source | mitogen-activated protein kinase 10 | 6962 | 0.002 | -0.2662 | No |
| 22 | TCF4 | TCF4 Entrez, Source | transcription factor 4 | 7631 | -0.005 | -0.3153 | No |
| 23 | PTPRM | PTPRM Entrez, Source | protein tyrosine phosphatase, receptor type, M | 8923 | -0.021 | -0.4078 | No |
| 24 | B2M | B2M Entrez, Source | beta-2-microglobulin | 9260 | -0.025 | -0.4275 | No |
| 25 | SCN1B | SCN1B Entrez, Source | sodium channel, voltage-gated, type I, beta | 10150 | -0.039 | -0.4857 | No |
| 26 | GABARAPL2 | GABARAPL2 Entrez, Source | GABA(A) receptor-associated protein-like 2 | 10237 | -0.040 | -0.4833 | No |
| 27 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 10292 | -0.041 | -0.4783 | No |
| 28 | VAMP3 | VAMP3 Entrez, Source | vesicle-associated membrane protein 3 (cellubrevin) | 10788 | -0.051 | -0.5042 | No |
| 29 | CD63 | CD63 Entrez, Source | CD63 molecule | 10826 | -0.052 | -0.4956 | No |
| 30 | IL18 | IL18 Entrez, Source | interleukin 18 (interferon-gamma-inducing factor) | 10944 | -0.055 | -0.4923 | No |
| 31 | IL3RA | IL3RA Entrez, Source | interleukin 3 receptor, alpha (low affinity) | 11374 | -0.064 | -0.5105 | Yes |
| 32 | PTTG1IP | PTTG1IP Entrez, Source | pituitary tumor-transforming 1 interacting protein | 11500 | -0.068 | -0.5049 | Yes |
| 33 | FGF2 | FGF2 Entrez, Source | fibroblast growth factor 2 (basic) | 11687 | -0.075 | -0.5024 | Yes |
| 34 | SPRY2 | SPRY2 Entrez, Source | sprouty homolog 2 (Drosophila) | 11800 | -0.079 | -0.4934 | Yes |
| 35 | CTBP2 | CTBP2 Entrez, Source | C-terminal binding protein 2 | 11872 | -0.082 | -0.4808 | Yes |
| 36 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 12073 | -0.090 | -0.4760 | Yes |
| 37 | RAB13 | RAB13 Entrez, Source | RAB13, member RAS oncogene family | 12213 | -0.098 | -0.4650 | Yes |
| 38 | IL1R2 | IL1R2 Entrez, Source | interleukin 1 receptor, type II | 12286 | -0.103 | -0.4479 | Yes |
| 39 | PPIC | PPIC Entrez, Source | peptidylprolyl isomerase C (cyclophilin C) | 12389 | -0.110 | -0.4313 | Yes |
| 40 | EMP1 | EMP1 Entrez, Source | epithelial membrane protein 1 | 12519 | -0.119 | -0.4148 | Yes |
| 41 | SMPDL3A | SMPDL3A Entrez, Source | sphingomyelin phosphodiesterase, acid-like 3A | 12687 | -0.133 | -0.3981 | Yes |
| 42 | TRIM2 | TRIM2 Entrez, Source | tripartite motif-containing 2 | 12840 | -0.154 | -0.3756 | Yes |
| 43 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 13083 | -0.223 | -0.3447 | Yes |
| 44 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 13187 | -0.286 | -0.2897 | Yes |
| 45 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 13250 | -0.352 | -0.2170 | Yes |
| 46 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 13312 | -0.498 | -0.1121 | Yes |
| 47 | PRSS23 | PRSS23 Entrez, Source | protease, serine, 23 | 13319 | -0.520 | 0.0017 | Yes |
