Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | BRG1_ALAB_UP |
| Enrichment Score (ES) | -0.66201836 |
| Normalized Enrichment Score (NES) | -1.8490447 |
| Nominal p-value | 0.0089126555 |
| FDR q-value | 0.033208158 |
| FWER p-Value | 0.875 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | GPR56 | GPR56 Entrez, Source | G protein-coupled receptor 56 | 553 | 0.122 | 0.0001 | No |
| 2 | PTPN7 | PTPN7 Entrez, Source | protein tyrosine phosphatase, non-receptor type 7 | 2181 | 0.064 | -0.1000 | No |
| 3 | TEC | TEC Entrez, Source | tec protein tyrosine kinase | 3424 | 0.044 | -0.1782 | No |
| 4 | SERPINE2 | SERPINE2 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 3843 | 0.039 | -0.1963 | No |
| 5 | FLNB | FLNB Entrez, Source | filamin B, beta (actin binding protein 278) | 4024 | 0.036 | -0.1974 | No |
| 6 | GADD45A | GADD45A Entrez, Source | growth arrest and DNA-damage-inducible, alpha | 5178 | 0.022 | -0.2766 | No |
| 7 | CDKN1A | CDKN1A Entrez, Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 5802 | 0.015 | -0.3182 | No |
| 8 | EMP3 | EMP3 Entrez, Source | epithelial membrane protein 3 | 7711 | -0.006 | -0.4594 | No |
| 9 | AGT | AGT Entrez, Source | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) | 7909 | -0.008 | -0.4714 | No |
| 10 | PLXNB2 | PLXNB2 Entrez, Source | plexin B2 | 9766 | -0.033 | -0.5994 | No |
| 11 | SMARCA4 | SMARCA4 Entrez, Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 9879 | -0.034 | -0.5960 | No |
| 12 | PPM2C | PPM2C Entrez, Source | protein phosphatase 2C, magnesium-dependent, catalytic subunit | 10759 | -0.051 | -0.6446 | Yes |
| 13 | SMARCA2 | SMARCA2 Entrez, Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 10834 | -0.052 | -0.6322 | Yes |
| 14 | CTSB | CTSB Entrez, Source | cathepsin B | 11054 | -0.057 | -0.6292 | Yes |
| 15 | CTSH | CTSH Entrez, Source | cathepsin H | 11083 | -0.058 | -0.6115 | Yes |
| 16 | MFGE8 | MFGE8 Entrez, Source | milk fat globule-EGF factor 8 protein | 11250 | -0.061 | -0.6030 | Yes |
| 17 | PHLDB1 | PHLDB1 Entrez, Source | pleckstrin homology-like domain, family B, member 1 | 11311 | -0.063 | -0.5860 | Yes |
| 18 | FBLIM1 | FBLIM1 Entrez, Source | filamin binding LIM protein 1 | 11966 | -0.086 | -0.6058 | Yes |
| 19 | FADS3 | FADS3 Entrez, Source | fatty acid desaturase 3 | 12029 | -0.088 | -0.5802 | Yes |
| 20 | DCBLD2 | DCBLD2 Entrez, Source | discoidin, CUB and LCCL domain containing 2 | 12485 | -0.117 | -0.5744 | Yes |
| 21 | ACTN4 | ACTN4 Entrez, Source | actinin, alpha 4 | 12842 | -0.155 | -0.5481 | Yes |
| 22 | TPM1 | TPM1 Entrez, Source | tropomyosin 1 (alpha) | 12980 | -0.185 | -0.4951 | Yes |
| 23 | FHL2 | FHL2 Entrez, Source | four and a half LIM domains 2 | 13281 | -0.405 | -0.3788 | Yes |
| 24 | AHNAK | AHNAK Entrez, Source | AHNAK nucleoprotein (desmoyokin) | 13311 | -0.491 | -0.2127 | Yes |
| 25 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 13326 | -0.627 | 0.0012 | Yes |
