Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | CCAWWNAAGG_V$SRF_Q4 |
| Enrichment Score (ES) | -0.55156714 |
| Normalized Enrichment Score (NES) | -1.7406411 |
| Nominal p-value | 0.006535948 |
| FDR q-value | 0.05108493 |
| FWER p-Value | 0.999 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 66 | 0.256 | 0.0472 | No |
| 2 | NKX6-1 | NKX6-1 Entrez, Source | NK6 transcription factor related, locus 1 (Drosophila) | 280 | 0.152 | 0.0621 | No |
| 3 | MBNL1 | MBNL1 Entrez, Source | muscleblind-like (Drosophila) | 342 | 0.143 | 0.0866 | No |
| 4 | RARB | RARB Entrez, Source | retinoic acid receptor, beta | 394 | 0.136 | 0.1106 | No |
| 5 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 546 | 0.122 | 0.1240 | No |
| 6 | ATRX | ATRX Entrez, Source | alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | 1024 | 0.096 | 0.1078 | No |
| 7 | TNNC1 | TNNC1 Entrez, Source | troponin C type 1 (slow) | 1428 | 0.082 | 0.0942 | No |
| 8 | TITF1 | TITF1 Entrez, Source | thyroid transcription factor 1 | 1498 | 0.079 | 0.1052 | No |
| 9 | MRGPRF | MRGPRF Entrez, Source | MAS-related GPR, member F | 2177 | 0.064 | 0.0673 | No |
| 10 | MYH11 | MYH11 Entrez, Source | myosin, heavy chain 11, smooth muscle | 2696 | 0.055 | 0.0396 | No |
| 11 | LSP1 | LSP1 Entrez, Source | lymphocyte-specific protein 1 | 3215 | 0.047 | 0.0103 | No |
| 12 | NPPA | NPPA Entrez, Source | natriuretic peptide precursor A | 3492 | 0.043 | -0.0017 | No |
| 13 | FGFRL1 | FGFRL1 Entrez, Source | fibroblast growth factor receptor-like 1 | 5463 | 0.019 | -0.1460 | No |
| 14 | CKM | CKM Entrez, Source | creatine kinase, muscle | 5748 | 0.015 | -0.1642 | No |
| 15 | KCNK3 | KCNK3 Entrez, Source | potassium channel, subfamily K, member 3 | 5875 | 0.014 | -0.1708 | No |
| 16 | ANP32E | ANP32E Entrez, Source | acidic (leucine-rich) nuclear phosphoprotein 32 family, member E | 6197 | 0.011 | -0.1927 | No |
| 17 | SDPR | SDPR Entrez, Source | serum deprivation response (phosphatidylserine binding protein) | 6834 | 0.004 | -0.2397 | No |
| 18 | SCN3B | SCN3B Entrez, Source | sodium channel, voltage-gated, type III, beta | 6917 | 0.003 | -0.2453 | No |
| 19 | NR4A1 | NR4A1 Entrez, Source | nuclear receptor subfamily 4, group A, member 1 | 6992 | 0.002 | -0.2504 | No |
| 20 | PLCB3 | PLCB3 Entrez, Source | phospholipase C, beta 3 (phosphatidylinositol-specific) | 7116 | 0.001 | -0.2595 | No |
| 21 | TCF4 | TCF4 Entrez, Source | transcription factor 4 | 7631 | -0.005 | -0.2971 | No |
| 22 | DUSP2 | DUSP2 Entrez, Source | dual specificity phosphatase 2 | 7690 | -0.006 | -0.3004 | No |
| 23 | DUSP5 | DUSP5 Entrez, Source | dual specificity phosphatase 5 | 8419 | -0.014 | -0.3521 | No |
| 24 | TRDN | TRDN Entrez, Source | triadin | 9180 | -0.024 | -0.4043 | No |
| 25 | PHF12 | PHF12 Entrez, Source | PHD finger protein 12 | 9599 | -0.030 | -0.4296 | No |
| 26 | PFN1 | PFN1 Entrez, Source | profilin 1 | 10319 | -0.042 | -0.4751 | No |
| 27 | ACTG2 | ACTG2 Entrez, Source | actin, gamma 2, smooth muscle, enteric | 10430 | -0.044 | -0.4744 | No |
| 28 | SFRS12 | SFRS12 Entrez, Source | splicing factor, arginine/serine-rich 12 | 10579 | -0.047 | -0.4760 | No |
| 29 | PPP1R12A | PPP1R12A Entrez, Source | protein phosphatase 1, regulatory (inhibitor) subunit 12A | 10736 | -0.050 | -0.4776 | No |
| 30 | EPHB1 | EPHB1 Entrez, Source | EPH receptor B1 | 10916 | -0.054 | -0.4800 | No |
| 31 | ACTB | ACTB Entrez, Source | actin, beta | 11264 | -0.061 | -0.4935 | No |
| 32 | DAPK3 | DAPK3 Entrez, Source | death-associated protein kinase 3 | 11659 | -0.074 | -0.5080 | No |
| 33 | DIXDC1 | DIXDC1 Entrez, Source | DIX domain containing 1 | 12239 | -0.099 | -0.5314 | Yes |
| 34 | MAPKAPK2 | MAPKAPK2 Entrez, Source | mitogen-activated protein kinase-activated protein kinase 2 | 12240 | -0.099 | -0.5113 | Yes |
| 35 | PICALM | PICALM Entrez, Source | phosphatidylinositol binding clathrin assembly protein | 12285 | -0.102 | -0.4937 | Yes |
| 36 | RAB30 | RAB30 Entrez, Source | RAB30, member RAS oncogene family | 12489 | -0.117 | -0.4852 | Yes |
| 37 | CALD1 | CALD1 Entrez, Source | caldesmon 1 | 12735 | -0.139 | -0.4753 | Yes |
| 38 | CSRP1 | CSRP1 Entrez, Source | cysteine and glycine-rich protein 1 | 12832 | -0.153 | -0.4513 | Yes |
| 39 | PLN | PLN Entrez, Source | phospholamban | 12849 | -0.156 | -0.4207 | Yes |
| 40 | TAGLN | TAGLN Entrez, Source | transgelin | 13341 | -1.059 | -0.2418 | Yes |
| 41 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 13342 | -1.187 | -0.0000 | Yes |
