Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | CMV_IE86_UP |
| Enrichment Score (ES) | -0.62560356 |
| Normalized Enrichment Score (NES) | -1.7650069 |
| Nominal p-value | 0.0073260074 |
| FDR q-value | 0.04757843 |
| FWER p-Value | 0.995 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DHFR | DHFR Entrez, Source | dihydrofolate reductase | 883 | 0.103 | -0.0231 | No |
| 2 | UNG | UNG Entrez, Source | uracil-DNA glycosylase | 2374 | 0.061 | -0.1096 | No |
| 3 | CSPG5 | CSPG5 Entrez, Source | chondroitin sulfate proteoglycan 5 (neuroglycan C) | 2439 | 0.060 | -0.0894 | No |
| 4 | UMPS | UMPS Entrez, Source | uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) | 4001 | 0.036 | -0.1915 | No |
| 5 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 4258 | 0.033 | -0.1969 | No |
| 6 | CCNE1 | CCNE1 Entrez, Source | cyclin E1 | 5568 | 0.017 | -0.2879 | No |
| 7 | TMEM106C | TMEM106C Entrez, Source | transmembrane protein 106C | 8042 | -0.010 | -0.4694 | No |
| 8 | TFAM | TFAM Entrez, Source | transcription factor A, mitochondrial | 8113 | -0.011 | -0.4701 | No |
| 9 | BARD1 | BARD1 Entrez, Source | BRCA1 associated RING domain 1 | 8325 | -0.013 | -0.4804 | No |
| 10 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 8337 | -0.013 | -0.4757 | No |
| 11 | RFC2 | RFC2 Entrez, Source | replication factor C (activator 1) 2, 40kDa | 8785 | -0.019 | -0.5012 | No |
| 12 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 8957 | -0.021 | -0.5051 | No |
| 13 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 9257 | -0.025 | -0.5170 | No |
| 14 | DCK | DCK Entrez, Source | deoxycytidine kinase | 10358 | -0.043 | -0.5819 | No |
| 15 | PTTG1 | PTTG1 Entrez, Source | pituitary tumor-transforming 1 | 10625 | -0.047 | -0.5820 | No |
| 16 | POLD3 | POLD3 Entrez, Source | polymerase (DNA-directed), delta 3, accessory subunit | 10993 | -0.056 | -0.5863 | No |
| 17 | BTG3 | BTG3 Entrez, Source | BTG family, member 3 | 11098 | -0.058 | -0.5699 | No |
| 18 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 11841 | -0.081 | -0.5918 | Yes |
| 19 | CASP3 | CASP3 Entrez, Source | caspase 3, apoptosis-related cysteine peptidase | 12003 | -0.087 | -0.5676 | Yes |
| 20 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 12106 | -0.092 | -0.5369 | Yes |
| 21 | MSH2 | MSH2 Entrez, Source | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | 12287 | -0.103 | -0.5075 | Yes |
| 22 | RFC3 | RFC3 Entrez, Source | replication factor C (activator 1) 3, 38kDa | 12734 | -0.139 | -0.4829 | Yes |
| 23 | TYMS | TYMS Entrez, Source | thymidylate synthetase | 12749 | -0.141 | -0.4252 | Yes |
| 24 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 12754 | -0.142 | -0.3662 | Yes |
| 25 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13301 | -0.469 | -0.2109 | Yes |
| 26 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 13316 | -0.512 | 0.0020 | Yes |
