Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | DFOSB_BRAIN_2WKS_UP |
| Enrichment Score (ES) | -0.6073737 |
| Normalized Enrichment Score (NES) | -1.7597805 |
| Nominal p-value | 0.0089126555 |
| FDR q-value | 0.049384743 |
| FWER p-Value | 0.997 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HMGCS1 | HMGCS1 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | 36 | 0.306 | 0.1108 | No |
| 2 | SYT2 | SYT2 Entrez, Source | synaptotagmin II | 1220 | 0.089 | 0.0551 | No |
| 3 | STMN2 | STMN2 Entrez, Source | stathmin-like 2 | 1500 | 0.079 | 0.0636 | No |
| 4 | GEFT | GEFT Entrez, Source | - | 3507 | 0.043 | -0.0711 | No |
| 5 | VSNL1 | VSNL1 Entrez, Source | visinin-like 1 | 3879 | 0.038 | -0.0848 | No |
| 6 | APBA2 | APBA2 Entrez, Source | amyloid beta (A4) precursor protein-binding, family A, member 2 (X11-like) | 4274 | 0.033 | -0.1022 | No |
| 7 | ACCN1 | ACCN1 Entrez, Source | amiloride-sensitive cation channel 1, neuronal (degenerin) | 4520 | 0.030 | -0.1095 | No |
| 8 | NOV | NOV Entrez, Source | nephroblastoma overexpressed gene | 4769 | 0.027 | -0.1182 | No |
| 9 | GSTO1 | GSTO1 Entrez, Source | glutathione S-transferase omega 1 | 4785 | 0.026 | -0.1095 | No |
| 10 | GARS | GARS Entrez, Source | glycyl-tRNA synthetase | 5929 | 0.014 | -0.1903 | No |
| 11 | CADPS | CADPS Entrez, Source | Ca2+-dependent secretion activator | 6133 | 0.012 | -0.2012 | No |
| 12 | ADARB1 | ADARB1 Entrez, Source | adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) | 6346 | 0.009 | -0.2137 | No |
| 13 | PIB5PA | PIB5PA Entrez, Source | phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A | 7052 | 0.001 | -0.2661 | No |
| 14 | PTPRK | PTPRK Entrez, Source | protein tyrosine phosphatase, receptor type, K | 7463 | -0.003 | -0.2957 | No |
| 15 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 7962 | -0.009 | -0.3297 | No |
| 16 | SCN1A | SCN1A Entrez, Source | sodium channel, voltage-gated, type I, alpha | 8392 | -0.014 | -0.3567 | No |
| 17 | OLFM1 | OLFM1 Entrez, Source | olfactomedin 1 | 9453 | -0.028 | -0.4258 | No |
| 18 | SMAD1 | SMAD1 Entrez, Source | SMAD, mothers against DPP homolog 1 (Drosophila) | 9561 | -0.030 | -0.4228 | No |
| 19 | MOBP | MOBP Entrez, Source | myelin-associated oligodendrocyte basic protein | 9796 | -0.033 | -0.4279 | No |
| 20 | SERPINI1 | SERPINI1 Entrez, Source | serpin peptidase inhibitor, clade I (neuroserpin), member 1 | 10346 | -0.042 | -0.4535 | No |
| 21 | IMPACT | IMPACT Entrez, Source | Impact homolog (mouse) | 10606 | -0.047 | -0.4554 | No |
| 22 | NEFH | NEFH Entrez, Source | neurofilament, heavy polypeptide 200kDa | 10917 | -0.054 | -0.4586 | No |
| 23 | SEPT9 | SEPT9 Entrez, Source | septin 9 | 11321 | -0.063 | -0.4654 | No |
| 24 | BDNF | BDNF Entrez, Source | brain-derived neurotrophic factor | 13212 | -0.305 | -0.4941 | Yes |
| 25 | FHL2 | FHL2 Entrez, Source | four and a half LIM domains 2 | 13281 | -0.405 | -0.3487 | Yes |
| 26 | STMN1 | STMN1 Entrez, Source | stathmin 1/oncoprotein 18 | 13294 | -0.447 | -0.1834 | Yes |
| 27 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 13313 | -0.503 | 0.0022 | Yes |
