Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | DORSEY_DOXYCYCLINE_UP |
| Enrichment Score (ES) | -0.68630534 |
| Normalized Enrichment Score (NES) | -1.7727387 |
| Nominal p-value | 0.009107468 |
| FDR q-value | 0.047055267 |
| FWER p-Value | 0.992 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | GNG11 | GNG11 Entrez, Source | guanine nucleotide binding protein (G protein), gamma 11 | 35 | 0.306 | 0.1415 | No |
| 2 | SPARC | SPARC Entrez, Source | secreted protein, acidic, cysteine-rich (osteonectin) | 2588 | 0.057 | -0.0232 | No |
| 3 | COL1A1 | COL1A1 Entrez, Source | collagen, type I, alpha 1 | 4462 | 0.030 | -0.1494 | No |
| 4 | ACVR1 | ACVR1 Entrez, Source | activin A receptor, type I | 5955 | 0.013 | -0.2551 | No |
| 5 | GRIK1 | GRIK1 Entrez, Source | glutamate receptor, ionotropic, kainate 1 | 6105 | 0.012 | -0.2607 | No |
| 6 | IL13RA2 | IL13RA2 Entrez, Source | interleukin 13 receptor, alpha 2 | 6144 | 0.011 | -0.2581 | No |
| 7 | AKAP12 | AKAP12 Entrez, Source | A kinase (PRKA) anchor protein (gravin) 12 | 6511 | 0.007 | -0.2821 | No |
| 8 | ATP1B1 | ATP1B1 Entrez, Source | ATPase, Na+/K+ transporting, beta 1 polypeptide | 7708 | -0.006 | -0.3691 | No |
| 9 | STC1 | STC1 Entrez, Source | stanniocalcin 1 | 8140 | -0.011 | -0.3962 | No |
| 10 | DUSP5 | DUSP5 Entrez, Source | dual specificity phosphatase 5 | 8419 | -0.014 | -0.4103 | No |
| 11 | PRSS1 | PRSS1 Entrez, Source | protease, serine, 1 (trypsin 1) | 8920 | -0.021 | -0.4380 | No |
| 12 | GSN | GSN Entrez, Source | gelsolin (amyloidosis, Finnish type) | 12230 | -0.098 | -0.6399 | Yes |
| 13 | TFPI2 | TFPI2 Entrez, Source | tissue factor pathway inhibitor 2 | 12427 | -0.112 | -0.6017 | Yes |
| 14 | CD44 | CD44 Entrez, Source | CD44 molecule (Indian blood group) | 12977 | -0.184 | -0.5563 | Yes |
| 15 | CRYAB | CRYAB Entrez, Source | crystallin, alpha B | 13206 | -0.298 | -0.4332 | Yes |
| 16 | CD69 | CD69 Entrez, Source | CD69 molecule | 13297 | -0.457 | -0.2248 | Yes |
| 17 | SERPINE1 | SERPINE1 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 13308 | -0.484 | 0.0026 | Yes |
