Details for gene set HSA00260_GLYCINE_SERINE_AND_THREONINE

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos
Phenotype	class.cls#double_gel_48h_versus_single_gel_48h_repos
Upregulated in class	double_gel_48h
GeneSet	HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM
Enrichment Score (ES)	0.7085548
Normalized Enrichment Score (NES)	2.3234105
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PEMT	PEMT Entrez, Source	phosphatidylethanolamine N-methyltransferase	4	0.491	0.1759	Yes
2	ABP1	ABP1 Entrez, Source	amiloride binding protein 1 (amine oxidase (copper-containing))	113	0.213	0.2441	Yes
3	GNMT	GNMT Entrez, Source	glycine N-methyltransferase	165	0.186	0.3068	Yes
4	CHDH	CHDH Entrez, Source	choline dehydrogenase	208	0.171	0.3649	Yes
5	BHMT	BHMT Entrez, Source	betaine-homocysteine methyltransferase	237	0.162	0.4209	Yes
6	ALAS1	ALAS1 Entrez, Source	aminolevulinate, delta-, synthase 1	300	0.149	0.4698	Yes
7	SARDH	SARDH Entrez, Source	sarcosine dehydrogenase	566	0.121	0.4931	Yes
8	AGXT	AGXT Entrez, Source	alanine-glyoxylate aminotransferase (oxalosis I; hyperoxaluria I; glycolicaciduria; serine-pyruvate aminotransferase)	591	0.118	0.5337	Yes
9	PSPH	PSPH Entrez, Source	phosphoserine phosphatase	746	0.109	0.5612	Yes
10	GAMT	GAMT Entrez, Source	guanidinoacetate N-methyltransferase	910	0.102	0.5856	Yes
11	AKR1B10	AKR1B10 Entrez, Source	aldo-keto reductase family 1, member B10 (aldose reductase)	1081	0.094	0.6066	Yes
12	CBS	CBS Entrez, Source	cystathionine-beta-synthase	1127	0.092	0.6362	Yes
13	CTH	CTH Entrez, Source	cystathionase (cystathionine gamma-lyase)	1284	0.086	0.6555	Yes
14	RDH11	RDH11 Entrez, Source	retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	1395	0.083	0.6769	Yes
15	AOC3	AOC3 Entrez, Source	amine oxidase, copper containing 3 (vascular adhesion protein 1)	1556	0.078	0.6929	Yes
16	DMGDH	DMGDH Entrez, Source	dimethylglycine dehydrogenase	1702	0.074	0.7086	Yes
17	AMT	AMT Entrez, Source	aminomethyltransferase	3552	0.042	0.5848	No
18	SDS	SDS Entrez, Source	serine dehydratase	3684	0.041	0.5895	No
19	SHMT2	SHMT2 Entrez, Source	serine hydroxymethyltransferase 2 (mitochondrial)	3728	0.040	0.6006	No
20	AGXT2	AGXT2 Entrez, Source	alanine-glyoxylate aminotransferase 2	4019	0.036	0.5918	No
21	GATM	GATM Entrez, Source	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	4229	0.033	0.5880	No
22	PSAT1	PSAT1 Entrez, Source	phosphoserine aminotransferase 1	4505	0.030	0.5781	No
23	SHMT1	SHMT1 Entrez, Source	serine hydroxymethyltransferase 1 (soluble)	4738	0.027	0.5704	No
24	GCAT	GCAT Entrez, Source	glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase)	4809	0.026	0.5745	No
25	MAOA	MAOA Entrez, Source	monoamine oxidase A	5177	0.022	0.5548	No
26	CHKA	CHKA Entrez, Source	choline kinase alpha	5540	0.018	0.5340	No
27	TARS	TARS Entrez, Source	threonyl-tRNA synthetase	5585	0.017	0.5368	No
28	DLD	DLD Entrez, Source	dihydrolipoamide dehydrogenase	5876	0.014	0.5201	No
29	GARS	GARS Entrez, Source	glycyl-tRNA synthetase	5929	0.014	0.5211	No
30	HSD3B7	HSD3B7 Entrez, Source	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	8545	-0.016	0.3303	No
31	MAOB	MAOB Entrez, Source	monoamine oxidase B	8794	-0.019	0.3186	No
32	ALAS2	ALAS2 Entrez, Source	aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)	8816	-0.019	0.3240	No
33	PHGDH	PHGDH Entrez, Source	phosphoglycerate dehydrogenase	8945	-0.021	0.3219	No
34	CHKB	CHKB Entrez, Source	choline kinase beta	9113	-0.023	0.3178	No