Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | IDX_TSA_DN_CLUSTER1 |
| Enrichment Score (ES) | -0.59221 |
| Normalized Enrichment Score (NES) | -1.7950685 |
| Nominal p-value | 0.0017699115 |
| FDR q-value | 0.042888645 |
| FWER p-Value | 0.979 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 213 | 0.170 | 0.0399 | No |
| 2 | FBN1 | FBN1 Entrez, Source | fibrillin 1 | 423 | 0.133 | 0.0678 | No |
| 3 | NQO1 | NQO1 Entrez, Source | NAD(P)H dehydrogenase, quinone 1 | 2016 | 0.068 | -0.0295 | No |
| 4 | FBLN2 | FBLN2 Entrez, Source | fibulin 2 | 2463 | 0.059 | -0.0435 | No |
| 5 | PTGS1 | PTGS1 Entrez, Source | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) | 3007 | 0.050 | -0.0679 | No |
| 6 | SSR3 | SSR3 Entrez, Source | signal sequence receptor, gamma (translocon-associated protein gamma) | 3557 | 0.042 | -0.0952 | No |
| 7 | SYNPO | SYNPO Entrez, Source | synaptopodin | 4486 | 0.030 | -0.1550 | No |
| 8 | RBP1 | RBP1 Entrez, Source | retinol binding protein 1, cellular | 4518 | 0.030 | -0.1475 | No |
| 9 | IL6ST | IL6ST Entrez, Source | interleukin 6 signal transducer (gp130, oncostatin M receptor) | 5234 | 0.021 | -0.1943 | No |
| 10 | DLK1 | DLK1 Entrez, Source | delta-like 1 homolog (Drosophila) | 5246 | 0.021 | -0.1882 | No |
| 11 | XPO1 | XPO1 Entrez, Source | exportin 1 (CRM1 homolog, yeast) | 5406 | 0.019 | -0.1938 | No |
| 12 | PROS1 | PROS1 Entrez, Source | protein S (alpha) | 5663 | 0.016 | -0.2076 | No |
| 13 | DNM1 | DNM1 Entrez, Source | dynamin 1 | 6060 | 0.012 | -0.2334 | No |
| 14 | BAT3 | BAT3 Entrez, Source | HLA-B associated transcript 3 | 7511 | -0.004 | -0.3410 | No |
| 15 | SLC29A1 | SLC29A1 Entrez, Source | solute carrier family 29 (nucleoside transporters), member 1 | 8957 | -0.021 | -0.4425 | No |
| 16 | RHOJ | RHOJ Entrez, Source | ras homolog gene family, member J | 9039 | -0.022 | -0.4413 | No |
| 17 | TINAGL1 | TINAGL1 Entrez, Source | tubulointerstitial nephritis antigen-like 1 | 9212 | -0.025 | -0.4461 | No |
| 18 | SEP15 | SEP15 Entrez, Source | - | 9382 | -0.027 | -0.4498 | No |
| 19 | SLC6A8 | SLC6A8 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 9691 | -0.032 | -0.4625 | No |
| 20 | PLXNB2 | PLXNB2 Entrez, Source | plexin B2 | 9766 | -0.033 | -0.4572 | No |
| 21 | IFITM3 | IFITM3 Entrez, Source | interferon induced transmembrane protein 3 (1-8U) | 10326 | -0.042 | -0.4854 | No |
| 22 | TGFBI | TGFBI Entrez, Source | transforming growth factor, beta-induced, 68kDa | 10868 | -0.053 | -0.5086 | No |
| 23 | CTTN | CTTN Entrez, Source | cortactin | 11597 | -0.072 | -0.5398 | No |
| 24 | VAMP5 | VAMP5 Entrez, Source | vesicle-associated membrane protein 5 (myobrevin) | 12296 | -0.103 | -0.5583 | Yes |
| 25 | WISP2 | WISP2 Entrez, Source | WNT1 inducible signaling pathway protein 2 | 12345 | -0.107 | -0.5267 | Yes |
| 26 | CD47 | CD47 Entrez, Source | CD47 molecule | 12956 | -0.177 | -0.5142 | Yes |
| 27 | CD44 | CD44 Entrez, Source | CD44 molecule (Indian blood group) | 12977 | -0.184 | -0.4552 | Yes |
| 28 | TPM4 | TPM4 Entrez, Source | tropomyosin 4 | 13032 | -0.200 | -0.3936 | Yes |
| 29 | TAGLN2 | TAGLN2 Entrez, Source | transgelin 2 | 13110 | -0.236 | -0.3217 | Yes |
| 30 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 13187 | -0.286 | -0.2335 | Yes |
| 31 | S100A6 | S100A6 Entrez, Source | S100 calcium binding protein A6 | 13234 | -0.331 | -0.1279 | Yes |
| 32 | CPE | CPE Entrez, Source | carboxypeptidase E | 13284 | -0.413 | 0.0044 | Yes |
