Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | IDX_TSA_DN_CLUSTER4 |
| Enrichment Score (ES) | 0.59728837 |
| Normalized Enrichment Score (NES) | 1.7282186 |
| Nominal p-value | 0.00913242 |
| FDR q-value | 0.049256407 |
| FWER p-Value | 0.994 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HMGCS1 | HMGCS1 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | 36 | 0.306 | 0.1474 | Yes |
| 2 | FDFT1 | FDFT1 Entrez, Source | farnesyl-diphosphate farnesyltransferase 1 | 44 | 0.291 | 0.2899 | Yes |
| 3 | SC4MOL | SC4MOL Entrez, Source | sterol-C4-methyl oxidase-like | 90 | 0.236 | 0.4025 | Yes |
| 4 | SQLE | SQLE Entrez, Source | squalene epoxidase | 112 | 0.214 | 0.5060 | Yes |
| 5 | FDPS | FDPS Entrez, Source | farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) | 171 | 0.184 | 0.5919 | Yes |
| 6 | MTM1 | MTM1 Entrez, Source | myotubularin 1 | 800 | 0.107 | 0.5973 | Yes |
| 7 | STRBP | STRBP Entrez, Source | spermatid perinuclear RNA binding protein | 1710 | 0.074 | 0.5653 | No |
| 8 | NSDHL | NSDHL Entrez, Source | NAD(P) dependent steroid dehydrogenase-like | 1768 | 0.073 | 0.5968 | No |
| 9 | RAB3IL1 | RAB3IL1 Entrez, Source | RAB3A interacting protein (rabin3)-like 1 | 5263 | 0.021 | 0.3447 | No |
| 10 | SDPR | SDPR Entrez, Source | serum deprivation response (phosphatidylserine binding protein) | 6834 | 0.004 | 0.2287 | No |
| 11 | TMEM37 | TMEM37 Entrez, Source | transmembrane protein 37 | 7014 | 0.002 | 0.2162 | No |
| 12 | DOCK9 | DOCK9 Entrez, Source | dedicator of cytokinesis 9 | 7211 | -0.000 | 0.2016 | No |
| 13 | UBE1C | UBE1C Entrez, Source | ubiquitin-activating enzyme E1C (UBA3 homolog, yeast) | 8552 | -0.016 | 0.1090 | No |
| 14 | ZFAND6 | ZFAND6 Entrez, Source | zinc finger, AN1-type domain 6 | 9468 | -0.029 | 0.0543 | No |
| 15 | ACADL | ACADL Entrez, Source | acyl-Coenzyme A dehydrogenase, long chain | 9656 | -0.031 | 0.0557 | No |
| 16 | ANXA6 | ANXA6 Entrez, Source | annexin A6 | 9885 | -0.035 | 0.0555 | No |
| 17 | PYGB | PYGB Entrez, Source | phosphorylase, glycogen; brain | 10620 | -0.047 | 0.0237 | No |
| 18 | ATP6V1C1 | ATP6V1C1 Entrez, Source | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 | 10948 | -0.055 | 0.0260 | No |
| 19 | FLOT1 | FLOT1 Entrez, Source | flotillin 1 | 11724 | -0.076 | 0.0053 | No |
| 20 | PKP2 | PKP2 Entrez, Source | plakophilin 2 | 12402 | -0.111 | 0.0091 | No |
| 21 | GYG1 | GYG1 Entrez, Source | glycogenin 1 | 12593 | -0.125 | 0.0562 | No |
