Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | single_gel_48h |
| GeneSet | LINDSTEDT_DEND_UP |
| Enrichment Score (ES) | -0.6241343 |
| Normalized Enrichment Score (NES) | -1.8470443 |
| Nominal p-value | 0.0088495575 |
| FDR q-value | 0.032540955 |
| FWER p-Value | 0.876 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | DUSP4 | DUSP4 Entrez, Source | dual specificity phosphatase 4 | 1225 | 0.089 | -0.0634 | No |
| 2 | MARCKS | MARCKS Entrez, Source | myristoylated alanine-rich protein kinase C substrate | 1730 | 0.074 | -0.0775 | No |
| 3 | BTG1 | BTG1 Entrez, Source | B-cell translocation gene 1, anti-proliferative | 2418 | 0.060 | -0.1098 | No |
| 4 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 3132 | 0.048 | -0.1478 | No |
| 5 | LAMP3 | LAMP3 Entrez, Source | lysosomal-associated membrane protein 3 | 4591 | 0.029 | -0.2480 | No |
| 6 | GADD45A | GADD45A Entrez, Source | growth arrest and DNA-damage-inducible, alpha | 5178 | 0.022 | -0.2850 | No |
| 7 | PLA2G6 | PLA2G6 Entrez, Source | phospholipase A2, group VI (cytosolic, calcium-independent) | 5243 | 0.021 | -0.2831 | No |
| 8 | CD80 | CD80 Entrez, Source | CD80 molecule | 7632 | -0.005 | -0.4608 | No |
| 9 | CFLAR | CFLAR Entrez, Source | CASP8 and FADD-like apoptosis regulator | 8465 | -0.015 | -0.5184 | No |
| 10 | OPTN | OPTN Entrez, Source | optineurin | 8689 | -0.018 | -0.5294 | No |
| 11 | ID2 | ID2 Entrez, Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 9384 | -0.027 | -0.5727 | No |
| 12 | IL2RA | IL2RA Entrez, Source | interleukin 2 receptor, alpha | 9496 | -0.029 | -0.5718 | No |
| 13 | NBN | NBN Entrez, Source | nibrin | 9779 | -0.033 | -0.5823 | No |
| 14 | PNRC1 | PNRC1 Entrez, Source | proline-rich nuclear receptor coactivator 1 | 10332 | -0.042 | -0.6102 | Yes |
| 15 | NFKBIA | NFKBIA Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 10388 | -0.043 | -0.6004 | Yes |
| 16 | CXCR4 | CXCR4 Entrez, Source | chemokine (C-X-C motif) receptor 4 | 10564 | -0.046 | -0.5986 | Yes |
| 17 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 10905 | -0.054 | -0.6068 | Yes |
| 18 | PSME2 | PSME2 Entrez, Source | proteasome (prosome, macropain) activator subunit 2 (PA28 beta) | 10964 | -0.055 | -0.5934 | Yes |
| 19 | TAP1 | TAP1 Entrez, Source | transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | 11267 | -0.062 | -0.5962 | Yes |
| 20 | SIAH2 | SIAH2 Entrez, Source | seven in absentia homolog 2 (Drosophila) | 11360 | -0.064 | -0.5825 | Yes |
| 21 | NFKB1 | NFKB1 Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) | 11510 | -0.069 | -0.5716 | Yes |
| 22 | LYN | LYN Entrez, Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 12083 | -0.091 | -0.5852 | Yes |
| 23 | NFKB2 | NFKB2 Entrez, Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) | 12192 | -0.096 | -0.5623 | Yes |
| 24 | KLF5 | KLF5 Entrez, Source | Kruppel-like factor 5 (intestinal) | 12409 | -0.112 | -0.5425 | Yes |
| 25 | BIRC3 | BIRC3 Entrez, Source | baculoviral IAP repeat-containing 3 | 12722 | -0.137 | -0.5217 | Yes |
| 26 | PDGFA | PDGFA Entrez, Source | platelet-derived growth factor alpha polypeptide | 13145 | -0.254 | -0.4715 | Yes |
| 27 | LAMB3 | LAMB3 Entrez, Source | laminin, beta 3 | 13233 | -0.329 | -0.3720 | Yes |
| 28 | ADM | ADM Entrez, Source | adrenomedullin | 13274 | -0.393 | -0.2482 | Yes |
| 29 | MARCKSL1 | MARCKSL1 Entrez, Source | MARCKS-like 1 | 13335 | -0.786 | 0.0005 | Yes |
