Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | SPECIFIC_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY |
| Enrichment Score (ES) | 0.61233413 |
| Normalized Enrichment Score (NES) | 1.628584 |
| Nominal p-value | 0.010893246 |
| FDR q-value | 0.08477319 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 0 | 1.012 | 0.5564 | Yes |
| 2 | SOX9 | SOX9 Entrez, Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 676 | 0.113 | 0.5682 | Yes |
| 3 | NR0B1 | NR0B1 Entrez, Source | nuclear receptor subfamily 0, group B, member 1 | 1027 | 0.096 | 0.5948 | Yes |
| 4 | RXRA | RXRA Entrez, Source | retinoid X receptor, alpha | 1400 | 0.083 | 0.6123 | Yes |
| 5 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 1957 | 0.069 | 0.6086 | No |
| 6 | ATF4 | ATF4 Entrez, Source | activating transcription factor 4 (tax-responsive enhancer element B67) | 3579 | 0.042 | 0.5100 | No |
| 7 | NOTCH2 | NOTCH2 Entrez, Source | Notch homolog 2 (Drosophila) | 3652 | 0.041 | 0.5272 | No |
| 8 | RXRB | RXRB Entrez, Source | retinoid X receptor, beta | 3669 | 0.041 | 0.5485 | No |
| 9 | NR2F1 | NR2F1 Entrez, Source | nuclear receptor subfamily 2, group F, member 1 | 4499 | 0.030 | 0.5028 | No |
| 10 | ZNF148 | ZNF148 Entrez, Source | zinc finger protein 148 | 6751 | 0.005 | 0.3365 | No |
| 11 | PKNOX1 | PKNOX1 Entrez, Source | PBX/knotted 1 homeobox 1 | 8550 | -0.016 | 0.2104 | No |
| 12 | BRD8 | BRD8 Entrez, Source | bromodomain containing 8 | 10958 | -0.055 | 0.0601 | No |
| 13 | IRF7 | IRF7 Entrez, Source | interferon regulatory factor 7 | 11527 | -0.069 | 0.0557 | No |
| 14 | DEK | DEK Entrez, Source | DEK oncogene (DNA binding) | 11531 | -0.070 | 0.0937 | No |
| 15 | USF1 | USF1 Entrez, Source | upstream transcription factor 1 | 11730 | -0.077 | 0.1209 | No |
