Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
| Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | TSA_CD4_DN |
| Enrichment Score (ES) | 0.5734471 |
| Normalized Enrichment Score (NES) | 1.6113466 |
| Nominal p-value | 0.034408603 |
| FDR q-value | 0.09207698 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | WNT4 | WNT4 Entrez, Source | wingless-type MMTV integration site family, member 4 | 16 | 0.365 | 0.2731 | Yes |
| 2 | RARB | RARB Entrez, Source | retinoic acid receptor, beta | 394 | 0.136 | 0.3472 | Yes |
| 3 | FGF18 | FGF18 Entrez, Source | fibroblast growth factor 18 | 452 | 0.130 | 0.4403 | Yes |
| 4 | LAT | LAT Entrez, Source | linker for activation of T cells | 1143 | 0.092 | 0.4574 | Yes |
| 5 | WNT7A | WNT7A Entrez, Source | wingless-type MMTV integration site family, member 7A | 1571 | 0.078 | 0.4838 | Yes |
| 6 | CX3CR1 | CX3CR1 Entrez, Source | chemokine (C-X3-C motif) receptor 1 | 1582 | 0.077 | 0.5413 | Yes |
| 7 | CD247 | CD247 Entrez, Source | CD247 molecule | 2477 | 0.059 | 0.5185 | Yes |
| 8 | SLC3A2 | SLC3A2 Entrez, Source | solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 | 2777 | 0.054 | 0.5364 | Yes |
| 9 | CD3D | CD3D Entrez, Source | CD3d molecule, delta (CD3-TCR complex) | 2816 | 0.053 | 0.5734 | Yes |
| 10 | NOTCH2 | NOTCH2 Entrez, Source | Notch homolog 2 (Drosophila) | 3652 | 0.041 | 0.5416 | No |
| 11 | METAP2 | METAP2 Entrez, Source | methionyl aminopeptidase 2 | 4167 | 0.034 | 0.5288 | No |
| 12 | ALPL | ALPL Entrez, Source | alkaline phosphatase, liver/bone/kidney | 4222 | 0.034 | 0.5499 | No |
| 13 | ICAM1 | ICAM1 Entrez, Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 8686 | -0.018 | 0.2284 | No |
| 14 | IL2RA | IL2RA Entrez, Source | interleukin 2 receptor, alpha | 9496 | -0.029 | 0.1894 | No |
| 15 | ENTPD2 | ENTPD2 Entrez, Source | ectonucleoside triphosphate diphosphohydrolase 2 | 11406 | -0.065 | 0.0952 | No |
| 16 | NOTCH1 | NOTCH1 Entrez, Source | Notch homolog 1, translocation-associated (Drosophila) | 11455 | -0.067 | 0.1416 | No |
