Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_48h_versus_single_gel_48h.class.cls
#double_gel_48h_versus_single_gel_48h_repos
Phenotypeclass.cls#double_gel_48h_versus_single_gel_48h_repos
Upregulated in classdouble_gel_48h
GeneSetV$HMEF2_Q6
Enrichment Score (ES)0.4560231
Normalized Enrichment Score (NES)1.6819334
Nominal p-value0.0
FDR q-value0.06318926
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$HMEF2_Q6   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FOSFOS
Entrez,  Source
v-fos FBJ murine osteosarcoma viral oncogene homolog01.0120.1878Yes
2EDG1EDG1
Entrez,  Source
endothelial differentiation, sphingolipid G-protein-coupled receptor, 130.5660.2928Yes
3GNG11GNG11
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 11350.3060.3473Yes
4MBNL1MBNL1
Entrez,  Source
muscleblind-like (Drosophila)3420.1430.3508Yes
5GPC4GPC4
Entrez,  Source
glypican 43720.1390.3744Yes
6ITGA7ITGA7
Entrez,  Source
integrin, alpha 77520.1090.3660Yes
7EPHA7EPHA7
Entrez,  Source
EPH receptor A78330.1050.3796Yes
8SLCO2A1SLCO2A1
Entrez,  Source
solute carrier organic anion transporter family, member 2A18940.1030.3942Yes
9ARL6IP2ARL6IP2
Entrez,  Source
ADP-ribosylation factor-like 6 interacting protein 210870.0940.3971Yes
10JPH2JPH2
Entrez,  Source
junctophilin 212420.0880.4019Yes
11KIAA1446KIAA1446
Entrez,  Source
-14270.0820.4033Yes
12TNNC1TNNC1
Entrez,  Source
troponin C type 1 (slow)14280.0820.4185Yes
13CASQ2CASQ2
Entrez,  Source
calsequestrin 2 (cardiac muscle)14510.0810.4318Yes
14BMP4BMP4
Entrez,  Source
bone morphogenetic protein 417270.0740.4248Yes
15MYO9AMYO9A
Entrez,  Source
myosin IXA17360.0730.4378Yes
16DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)19340.0700.4359Yes
17MYH6MYH6
Entrez,  Source
myosin, heavy chain 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)20660.0670.4384Yes
18HAS2HAS2
Entrez,  Source
hyaluronan synthase 221220.0650.4464Yes
19TNNI3KTNNI3K
Entrez,  Source
TNNI3 interacting kinase21550.0650.4560Yes
20KCNN1KCNN1
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 124960.0590.4413No
21FGF5FGF5
Entrez,  Source
fibroblast growth factor 526730.0560.4384No
22MYL2MYL2
Entrez,  Source
myosin, light chain 2, regulatory, cardiac, slow27050.0550.4463No
23IL17BIL17B
Entrez,  Source
interleukin 17B28020.0530.4489No
24SLC13A1SLC13A1
Entrez,  Source
solute carrier family 13 (sodium/sulfate symporters), member 131180.0480.4342No
25ART5ART5
Entrez,  Source
ADP-ribosyltransferase 532630.0460.4320No
26CACNA2D3CACNA2D3
Entrez,  Source
calcium channel, voltage-dependent, alpha 2/delta 3 subunit47610.0270.3242No
27WFDC1WFDC1
Entrez,  Source
WAP four-disulfide core domain 148030.0260.3260No
28PPP2R2BPPP2R2B
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform49580.0240.3190No
29GATA4GATA4
Entrez,  Source
GATA binding protein 453710.0200.2916No
30EHD1EHD1
Entrez,  Source
EH-domain containing 156790.0160.2715No
31CKMCKM
Entrez,  Source
creatine kinase, muscle57480.0150.2692No
32COLQCOLQ
Entrez,  Source
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase60220.0130.2510No
33KCNK9KCNK9
Entrez,  Source
potassium channel, subfamily K, member 961370.0120.2446No
34FGF6FGF6
Entrez,  Source
fibroblast growth factor 661990.0110.2420No
35ENO3ENO3
Entrez,  Source
enolase 3 (beta, muscle)63280.0090.2341No
36MYH4MYH4
Entrez,  Source
myosin, heavy chain 4, skeletal muscle64270.0080.2283No
37AKAP12AKAP12
Entrez,  Source
A kinase (PRKA) anchor protein (gravin) 1265110.0070.2234No
38MAS1MAS1
Entrez,  Source
MAS1 oncogene65850.0070.2191No
39DNAJA2DNAJA2
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily A, member 266430.0060.2160No
40HAPLN1HAPLN1
Entrez,  Source
hyaluronan and proteoglycan link protein 168550.0040.2007No
41NR4A1NR4A1
Entrez,  Source
nuclear receptor subfamily 4, group A, member 169920.0020.1909No
42SLC3A1SLC3A1
Entrez,  Source
17608-0.0050.1455No
43JUNJUN
Entrez,  Source
jun oncogene8081-0.0100.1119No
44CSPG3CSPG3
Entrez,  Source
chondroitin sulfate proteoglycan 3 (neurocan)8450-0.0150.0869No
45GRIN2BGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B8589-0.0170.0796No
46NFIXNFIX
Entrez,  Source
nuclear factor I/X (CCAAT-binding transcription factor)8634-0.0170.0795No
47EP300EP300
Entrez,  Source
E1A binding protein p3008639-0.0170.0825No
48TSC1TSC1
Entrez,  Source
tuberous sclerosis 18983-0.0220.0607No
49ELMO3ELMO3
Entrez,  Source
engulfment and cell motility 39745-0.0330.0094No
50MAP2K5MAP2K5
Entrez,  Source
mitogen-activated protein kinase kinase 511129-0.059-0.0838No
51HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A11917-0.084-0.1274No
52LUZP1LUZP1
Entrez,  Source
leucine zipper protein 112002-0.087-0.1176No
53LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog12083-0.091-0.1068No
54SMPXSMPX
Entrez,  Source
small muscle protein, X-linked12263-0.101-0.1016No
55ITGB3BPITGB3BP
Entrez,  Source
integrin beta 3 binding protein (beta3-endonexin)12281-0.102-0.0839No
56CAPN1CAPN1
Entrez,  Source
calpain 1, (mu/I) large subunit12425-0.112-0.0738No
57KCNJ9KCNJ9
Entrez,  Source
potassium inwardly-rectifying channel, subfamily J, member 912450-0.114-0.0544No
58SSH3SSH3
Entrez,  Source
slingshot homolog 3 (Drosophila)12854-0.157-0.0556No
59PDLIM1PDLIM1
Entrez,  Source
PDZ and LIM domain 1 (elfin)12939-0.173-0.0297No
60TIMP2TIMP2
Entrez,  Source
TIMP metallopeptidase inhibitor 213228-0.3230.0086No
Table: GSEA details [plain text format]



Fig 2: V$HMEF2_Q6   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$HMEF2_Q6: Random ES distribution   
Gene set null distribution of ES for V$HMEF2_Q6