Details for gene set V$NKX3A

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos
Phenotype	class.cls#double_gel_48h_versus_single_gel_48h_repos
Upregulated in class	double_gel_48h
GeneSet	V$NKX3A_01
Enrichment Score (ES)	0.3694304
Normalized Enrichment Score (NES)	1.4896526
Nominal p-value	0.014492754
FDR q-value	0.15209372
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	G6PC	G6PC Entrez, Source	glucose-6-phosphatase, catalytic subunit	26	0.337	0.0522	Yes
2	SLC25A25	SLC25A25 Entrez, Source	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	58	0.271	0.0934	Yes
3	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	66	0.256	0.1340	Yes
4	CHRM1	CHRM1 Entrez, Source	cholinergic receptor, muscarinic 1	169	0.184	0.1559	Yes
5	MYF6	MYF6 Entrez, Source	myogenic factor 6 (herculin)	205	0.172	0.1809	Yes
6	CART1	CART1 Entrez, Source	cartilage paired-class homeoprotein 1	296	0.150	0.1982	Yes
7	KCNMA1	KCNMA1 Entrez, Source	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	309	0.148	0.2212	Yes
8	MBNL1	MBNL1 Entrez, Source	muscleblind-like (Drosophila)	342	0.143	0.2417	Yes
9	LPHN1	LPHN1 Entrez, Source	latrophilin 1	651	0.115	0.2370	Yes
10	EMCN	EMCN Entrez, Source	endomucin	874	0.104	0.2369	Yes
11	KCNN3	KCNN3 Entrez, Source	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	884	0.103	0.2529	Yes
12	DLC1	DLC1 Entrez, Source	deleted in liver cancer 1	960	0.099	0.2631	Yes
13	PAX6	PAX6 Entrez, Source	paired box gene 6 (aniridia, keratitis)	990	0.098	0.2767	Yes
14	POU3F2	POU3F2 Entrez, Source	POU domain, class 3, transcription factor 2	1039	0.096	0.2884	Yes
15	BCL11A	BCL11A Entrez, Source	B-cell CLL/lymphoma 11A (zinc finger protein)	1053	0.095	0.3027	Yes
16	SULT2A1	SULT2A1 Entrez, Source	sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	1153	0.091	0.3099	Yes
17	WDR23	WDR23 Entrez, Source	WD repeat domain 23	1174	0.090	0.3230	Yes
18	LMO3	LMO3 Entrez, Source	LIM domain only 3 (rhombotin-like 2)	1366	0.084	0.3220	Yes
19	PTN	PTN Entrez, Source	pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1)	1439	0.081	0.3296	Yes
20	WNT7A	WNT7A Entrez, Source	wingless-type MMTV integration site family, member 7A	1571	0.078	0.3322	Yes
21	HOXA2	HOXA2 Entrez, Source	homeobox A2	1685	0.075	0.3357	Yes
22	MYH2	MYH2 Entrez, Source	myosin, heavy chain 2, skeletal muscle, adult	1689	0.074	0.3474	Yes
23	SIX1	SIX1 Entrez, Source	sine oculis homeobox homolog 1 (Drosophila)	1834	0.071	0.3480	Yes
24	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	1934	0.070	0.3517	Yes
25	JUNB	JUNB Entrez, Source	jun B proto-oncogene	2033	0.067	0.3552	Yes
26	MID1	MID1 Entrez, Source	midline 1 (Opitz/BBB syndrome)	2046	0.067	0.3650	Yes
27	TOB1	TOB1 Entrez, Source	transducer of ERBB2, 1	2158	0.065	0.3670	Yes
28	GRM8	GRM8 Entrez, Source	glutamate receptor, metabotropic 8	2349	0.061	0.3625	Yes
29	ADK	ADK Entrez, Source	adenosine kinase	2387	0.061	0.3694	Yes
30	SIP1	SIP1 Entrez, Source	survival of motor neuron protein interacting protein 1	2894	0.052	0.3396	No
31	NRXN3	NRXN3 Entrez, Source	neurexin 3	2925	0.051	0.3456	No
32	TCF12	TCF12 Entrez, Source	transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)	3016	0.050	0.3468	No
33	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	3166	0.048	0.3432	No
34	THRA	THRA Entrez, Source	thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)	3546	0.042	0.3214	No
35	PNMA1	PNMA1 Entrez, Source	paraneoplastic antigen MA1	3771	0.040	0.3108	No
36	LHX5	LHX5 Entrez, Source	LIM homeobox 5	3774	0.040	0.3170	No
37	H3F3B	H3F3B Entrez, Source	H3 histone, family 3B (H3.3B)	3836	0.039	0.3187	No
38	CDC2L1	CDC2L1 Entrez, Source	cell division cycle 2-like 1 (PITSLRE proteins)	4002	0.036	0.3121	No
39	OTP	OTP Entrez, Source	orthopedia homolog (Drosophila)	4337	0.032	0.2920	No
40	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	4499	0.030	0.2847	No
41	RNF12	RNF12 Entrez, Source	ring finger protein 12	4542	0.030	0.2863	No
42	KREMEN1	KREMEN1 Entrez, Source	kringle containing transmembrane protein 1	4566	0.029	0.2892	No
43	GPR12	GPR12 Entrez, Source	G protein-coupled receptor 12	4604	0.029	0.2911	No
44	SMAD5	SMAD5 Entrez, Source	SMAD, mothers against DPP homolog 5 (Drosophila)	4607	0.029	0.2955	No
45	PTHR1	PTHR1 Entrez, Source	parathyroid hormone receptor 1	4833	0.026	0.2827	No
46	RAB3C	RAB3C Entrez, Source	RAB3C, member RAS oncogene family	4837	0.026	0.2866	No
47	NOG	NOG Entrez, Source	noggin	4913	0.025	0.2850	No
48	PRKCBP1	PRKCBP1 Entrez, Source	protein kinase C binding protein 1	5072	0.023	0.2767	No
49	ZFHX1B	ZFHX1B Entrez, Source	zinc finger homeobox 1b	5318	0.020	0.2615	No
50	TACSTD2	TACSTD2 Entrez, Source	tumor-associated calcium signal transducer 2	5622	0.017	0.2413	No
51	PCSK2	PCSK2 Entrez, Source	proprotein convertase subtilisin/kexin type 2	5879	0.014	0.2243	No
52	GPR85	GPR85 Entrez, Source	G protein-coupled receptor 85	5957	0.013	0.2206	No
53	ERG	ERG Entrez, Source	v-ets erythroblastosis virus E26 oncogene homolog (avian)	6202	0.011	0.2039	No
54	SIX3	SIX3 Entrez, Source	sine oculis homeobox homolog 3 (Drosophila)	6344	0.009	0.1948	No
55	MYH4	MYH4 Entrez, Source	myosin, heavy chain 4, skeletal muscle	6427	0.008	0.1899	No
56	DHX30	DHX30 Entrez, Source	DEAH (Asp-Glu-Ala-His) box polypeptide 30	6578	0.007	0.1797	No
57	SLC35C2	SLC35C2 Entrez, Source	solute carrier family 35, member C2	6785	0.004	0.1648	No
58	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	6992	0.002	0.1496	No
59	ZBTB9	ZBTB9 Entrez, Source	zinc finger and BTB domain containing 9	7416	-0.003	0.1181	No
60	COMMD10	COMMD10 Entrez, Source	COMM domain containing 10	7694	-0.006	0.0981	No
61	STC1	STC1 Entrez, Source	stanniocalcin 1	8140	-0.011	0.0663	No
62	MYH8	MYH8 Entrez, Source	myosin, heavy chain 8, skeletal muscle, perinatal	8972	-0.022	0.0071	No
63	ZIC1	ZIC1 Entrez, Source	Zic family member 1 (odd-paired homolog, Drosophila)	8976	-0.022	0.0103	No
64	CASC3	CASC3 Entrez, Source	cancer susceptibility candidate 3	9112	-0.023	0.0039	No
65	IGSF4	IGSF4 Entrez, Source	immunoglobulin superfamily, member 4	9136	-0.024	0.0059	No
66	POU2F1	POU2F1 Entrez, Source	POU domain, class 2, transcription factor 1	9137	-0.024	0.0097	No
67	NNAT	NNAT Entrez, Source	neuronatin	9178	-0.024	0.0106	No
68	IFNG	IFNG Entrez, Source	interferon, gamma	9423	-0.028	-0.0034	No
69	POU3F4	POU3F4 Entrez, Source	POU domain, class 3, transcription factor 4	9521	-0.029	-0.0060	No
70	DAB1	DAB1 Entrez, Source	disabled homolog 1 (Drosophila)	9526	-0.029	-0.0016	No
71	SH3KBP1	SH3KBP1 Entrez, Source	SH3-domain kinase binding protein 1	9559	-0.030	0.0008	No
72	PSMA1	PSMA1 Entrez, Source	proteasome (prosome, macropain) subunit, alpha type, 1	9581	-0.030	0.0041	No
73	ATP2A2	ATP2A2 Entrez, Source	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	9652	-0.031	0.0038	No
74	AP3M1	AP3M1 Entrez, Source	adaptor-related protein complex 3, mu 1 subunit	9671	-0.032	0.0075	No
75	ELMO3	ELMO3 Entrez, Source	engulfment and cell motility 3	9745	-0.033	0.0073	No
76	LCP2	LCP2 Entrez, Source	lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	9952	-0.036	-0.0025	No
77	KIT	KIT Entrez, Source	v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	9974	-0.036	0.0017	No
78	COMMD3	COMMD3 Entrez, Source	COMM domain containing 3	10231	-0.040	-0.0111	No
79	GTF2B	GTF2B Entrez, Source	general transcription factor IIB	10363	-0.043	-0.0142	No
80	DDX17	DDX17 Entrez, Source	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	10913	-0.054	-0.0469	No
81	BIRC4	BIRC4 Entrez, Source	baculoviral IAP repeat-containing 4	11256	-0.061	-0.0628	No
82	NOTCH1	NOTCH1 Entrez, Source	Notch homolog 1, translocation-associated (Drosophila)	11455	-0.067	-0.0671	No
83	NRG1	NRG1 Entrez, Source	neuregulin 1	11626	-0.073	-0.0682	No
84	GSK3B	GSK3B Entrez, Source	glycogen synthase kinase 3 beta	11670	-0.074	-0.0594	No
85	LRP2	LRP2 Entrez, Source	low density lipoprotein-related protein 2	11861	-0.081	-0.0607	No
86	NRAS	NRAS Entrez, Source	neuroblastoma RAS viral (v-ras) oncogene homolog	12153	-0.094	-0.0675	No
87	ARHGAP17	ARHGAP17 Entrez, Source	Rho GTPase activating protein 17	12366	-0.108	-0.0661	No
88	LMNA	LMNA Entrez, Source	lamin A/C	12554	-0.122	-0.0606	No
89	NCDN	NCDN Entrez, Source	neurochondrin	12607	-0.126	-0.0444	No
90	TPM1	TPM1 Entrez, Source	tropomyosin 1 (alpha)	12980	-0.185	-0.0428	No
91	PROCR	PROCR Entrez, Source	protein C receptor, endothelial (EPCR)	13292	-0.436	0.0038	No