Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_48h_versus_single_gel_48h.class.cls #double_gel_48h_versus_single_gel_48h_repos |
Phenotype | class.cls#double_gel_48h_versus_single_gel_48h_repos |
Upregulated in class | double_gel_48h |
GeneSet | YATTNATC_UNKNOWN |
Enrichment Score (ES) | 0.34586856 |
Normalized Enrichment Score (NES) | 1.4897958 |
Nominal p-value | 0.003267974 |
FDR q-value | 0.1528496 |
FWER p-Value | 1.0 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | WNT4 | WNT4 Entrez,  Source | wingless-type MMTV integration site family, member 4 | 16 | 0.365 | 0.0380 | Yes |
2 | G6PC | G6PC Entrez,  Source | glucose-6-phosphatase, catalytic subunit | 26 | 0.337 | 0.0735 | Yes |
3 | CEBPA | CEBPA Entrez,  Source | CCAAT/enhancer binding protein (C/EBP), alpha | 46 | 0.289 | 0.1031 | Yes |
4 | GPC3 | GPC3 Entrez,  Source | glypican 3 | 221 | 0.167 | 0.1078 | Yes |
5 | F9 | F9 Entrez,  Source | coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) | 243 | 0.161 | 0.1235 | Yes |
6 | MPP4 | MPP4 Entrez,  Source | membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) | 297 | 0.150 | 0.1356 | Yes |
7 | CSF3 | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 359 | 0.141 | 0.1461 | Yes |
8 | HCRTR2 | HCRTR2 Entrez,  Source | hypocretin (orexin) receptor 2 | 363 | 0.140 | 0.1609 | Yes |
9 | RARB | RARB Entrez,  Source | retinoic acid receptor, beta | 394 | 0.136 | 0.1733 | Yes |
10 | ABLIM2 | ABLIM2 Entrez,  Source | actin binding LIM protein family, member 2 | 400 | 0.135 | 0.1874 | Yes |
11 | CAMK2D | CAMK2D Entrez,  Source | calcium/calmodulin-dependent protein kinase (CaM kinase) II delta | 404 | 0.135 | 0.2017 | Yes |
12 | UCN2 | UCN2 Entrez,  Source | urocortin 2 | 453 | 0.129 | 0.2120 | Yes |
13 | KIF5A | KIF5A Entrez,  Source | kinesin family member 5A | 471 | 0.128 | 0.2244 | Yes |
14 | AP1GBP1 | AP1GBP1 Entrez,  Source | AP1 gamma subunit binding protein 1 | 560 | 0.121 | 0.2307 | Yes |
15 | SORT1 | SORT1 Entrez,  Source | sortilin 1 | 578 | 0.119 | 0.2423 | Yes |
16 | CRY1 | CRY1 Entrez,  Source | cryptochrome 1 (photolyase-like) | 652 | 0.115 | 0.2491 | Yes |
17 | SEC14L2 | SEC14L2 Entrez,  Source | SEC14-like 2 (S. cerevisiae) | 710 | 0.111 | 0.2567 | Yes |
18 | NXPH4 | NXPH4 Entrez,  Source | neurexophilin 4 | 763 | 0.108 | 0.2645 | Yes |
19 | SLC38A3 | SLC38A3 Entrez,  Source | solute carrier family 38, member 3 | 779 | 0.108 | 0.2749 | Yes |
20 | SLC2A13 | SLC2A13 Entrez,  Source | solute carrier family 2 (facilitated glucose transporter), member 13 | 861 | 0.105 | 0.2800 | Yes |
21 | MYOD1 | MYOD1 Entrez,  Source | myogenic differentiation 1 | 868 | 0.104 | 0.2907 | Yes |
22 | IL23A | IL23A Entrez,  Source | interleukin 23, alpha subunit p19 | 950 | 0.099 | 0.2952 | Yes |
23 | DLC1 | DLC1 Entrez,  Source | deleted in liver cancer 1 | 960 | 0.099 | 0.3052 | Yes |
24 | MYH13 | MYH13 Entrez,  Source | myosin, heavy chain 13, skeletal muscle | 988 | 0.098 | 0.3136 | Yes |
25 | GRIA3 | GRIA3 Entrez,  Source | glutamate receptor, ionotrophic, AMPA 3 | 1320 | 0.085 | 0.2977 | Yes |
26 | CA4 | CA4 Entrez,  Source | carbonic anhydrase IV | 1388 | 0.083 | 0.3016 | Yes |
27 | STMN2 | STMN2 Entrez,  Source | stathmin-like 2 | 1500 | 0.079 | 0.3017 | Yes |
28 | PPP1R10 | PPP1R10 Entrez,  Source | protein phosphatase 1, regulatory subunit 10 | 1553 | 0.078 | 0.3062 | Yes |
29 | SLC16A10 | SLC16A10 Entrez,  Source | solute carrier family 16, member 10 (aromatic amino acid transporter) | 1567 | 0.078 | 0.3135 | Yes |
30 | CRH | CRH Entrez,  Source | corticotropin releasing hormone | 1645 | 0.076 | 0.3158 | Yes |
31 | HOXA2 | HOXA2 Entrez,  Source | homeobox A2 | 1685 | 0.075 | 0.3209 | Yes |
32 | PRL | PRL Entrez,  Source | prolactin | 1687 | 0.075 | 0.3288 | Yes |
33 | PCSK5 | PCSK5 Entrez,  Source | proprotein convertase subtilisin/kexin type 5 | 1726 | 0.074 | 0.3339 | Yes |
34 | MARCKS | MARCKS Entrez,  Source | myristoylated alanine-rich protein kinase C substrate | 1730 | 0.074 | 0.3415 | Yes |
35 | RAB43 | RAB43 Entrez,  Source | RAB43, member RAS oncogene family | 1899 | 0.070 | 0.3363 | Yes |
36 | DMD | DMD Entrez,  Source | dystrophin (muscular dystrophy, Duchenne and Becker types) | 1934 | 0.070 | 0.3412 | Yes |
37 | KCNH2 | KCNH2 Entrez,  Source | potassium voltage-gated channel, subfamily H (eag-related), member 2 | 1971 | 0.069 | 0.3459 | Yes |
38 | KCNIP2 | KCNIP2 Entrez,  Source | Kv channel interacting protein 2 | 2194 | 0.064 | 0.3359 | No |
39 | SP4 | SP4 Entrez,  Source | Sp4 transcription factor | 2208 | 0.064 | 0.3418 | No |
40 | GLRA1 | GLRA1 Entrez,  Source | glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man syndrome) | 2320 | 0.062 | 0.3400 | No |
41 | GABRB3 | GABRB3 Entrez,  Source | gamma-aminobutyric acid (GABA) A receptor, beta 3 | 2381 | 0.061 | 0.3420 | No |
42 | RGS8 | RGS8 Entrez,  Source | regulator of G-protein signalling 8 | 2585 | 0.057 | 0.3327 | No |
43 | AGTR2 | AGTR2 Entrez,  Source | angiotensin II receptor, type 2 | 2607 | 0.057 | 0.3372 | No |
44 | FGF5 | FGF5 Entrez,  Source | fibroblast growth factor 5 | 2673 | 0.056 | 0.3383 | No |
45 | HOXA1 | HOXA1 Entrez,  Source | homeobox A1 | 2685 | 0.056 | 0.3434 | No |
46 | GUCY2F | GUCY2F Entrez,  Source | guanylate cyclase 2F, retinal | 2753 | 0.054 | 0.3442 | No |
47 | TAC1 | TAC1 Entrez,  Source | tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) | 2930 | 0.051 | 0.3363 | No |
48 | IL3 | IL3 Entrez,  Source | interleukin 3 (colony-stimulating factor, multiple) | 2935 | 0.051 | 0.3415 | No |
49 | HMGN2 | HMGN2 Entrez,  Source | high-mobility group nucleosomal binding domain 2 | 3017 | 0.050 | 0.3407 | No |
50 | GC | GC Entrez,  Source | group-specific component (vitamin D binding protein) | 3034 | 0.050 | 0.3448 | No |
51 | SLC13A1 | SLC13A1 Entrez,  Source | solute carrier family 13 (sodium/sulfate symporters), member 1 | 3118 | 0.048 | 0.3438 | No |
52 | PLEC1 | PLEC1 Entrez,  Source | plectin 1, intermediate filament binding protein 500kDa | 3180 | 0.048 | 0.3442 | No |
53 | PTF1A | PTF1A Entrez,  Source | pancreas specific transcription factor, 1a | 3270 | 0.046 | 0.3425 | No |
54 | GRIK3 | GRIK3 Entrez,  Source | glutamate receptor, ionotropic, kainate 3 | 3319 | 0.046 | 0.3437 | No |
55 | AQP5 | AQP5 Entrez,  Source | aquaporin 5 | 3444 | 0.044 | 0.3390 | No |
56 | SLC5A2 | SLC5A2 Entrez,  Source | solute carrier family 5 (sodium/glucose cotransporter), member 2 | 3530 | 0.043 | 0.3371 | No |
57 | H3F3B | H3F3B Entrez,  Source | H3 histone, family 3B (H3.3B) | 3836 | 0.039 | 0.3182 | No |
58 | POLR3D | POLR3D Entrez,  Source | polymerase (RNA) III (DNA directed) polypeptide D, 44kDa | 3876 | 0.038 | 0.3194 | No |
59 | SEMA3A | SEMA3A Entrez,  Source | sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A | 3987 | 0.037 | 0.3150 | No |
60 | MRPS18B | MRPS18B Entrez,  Source | mitochondrial ribosomal protein S18B | 4053 | 0.036 | 0.3139 | No |
61 | F12 | F12 Entrez,  Source | coagulation factor XII (Hageman factor) | 4131 | 0.035 | 0.3118 | No |
62 | IGF1 | IGF1 Entrez,  Source | insulin-like growth factor 1 (somatomedin C) | 4345 | 0.032 | 0.2991 | No |
63 | PALMD | PALMD Entrez,  Source | palmdelphin | 4443 | 0.031 | 0.2950 | No |
64 | CALB1 | CALB1 Entrez,  Source | calbindin 1, 28kDa | 4543 | 0.030 | 0.2907 | No |
65 | AXIN2 | AXIN2 Entrez,  Source | axin 2 (conductin, axil) | 4670 | 0.028 | 0.2841 | No |
66 | TBXAS1 | TBXAS1 Entrez,  Source | thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) | 4744 | 0.027 | 0.2815 | No |
67 | RAB3C | RAB3C Entrez,  Source | RAB3C, member RAS oncogene family | 4837 | 0.026 | 0.2773 | No |
68 | ATP2A3 | ATP2A3 Entrez,  Source | ATPase, Ca++ transporting, ubiquitous | 4871 | 0.026 | 0.2775 | No |
69 | NR3C2 | NR3C2 Entrez,  Source | nuclear receptor subfamily 3, group C, member 2 | 4947 | 0.025 | 0.2745 | No |
70 | PPP2R2B | PPP2R2B Entrez,  Source | protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform | 4958 | 0.024 | 0.2764 | No |
71 | SLC12A1 | SLC12A1 Entrez,  Source | solute carrier family 12 (sodium/potassium/chloride transporters), member 1 | 5212 | 0.021 | 0.2595 | No |
72 | SYT1 | SYT1 Entrez,  Source | synaptotagmin I | 5561 | 0.018 | 0.2350 | No |
73 | MEOX2 | MEOX2 Entrez,  Source | mesenchyme homeobox 2 | 5743 | 0.016 | 0.2230 | No |
74 | EIF4E | EIF4E Entrez,  Source | eukaryotic translation initiation factor 4E | 5790 | 0.015 | 0.2211 | No |
75 | HNMT | HNMT Entrez,  Source | histamine N-methyltransferase | 6010 | 0.013 | 0.2059 | No |
76 | COLQ | COLQ Entrez,  Source | collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase | 6022 | 0.013 | 0.2064 | No |
77 | CPB1 | CPB1 Entrez,  Source | carboxypeptidase B1 (tissue) | 6098 | 0.012 | 0.2020 | No |
78 | KIF1B | KIF1B Entrez,  Source | kinesin family member 1B | 6130 | 0.012 | 0.2009 | No |
79 | NOVA1 | NOVA1 Entrez,  Source | neuro-oncological ventral antigen 1 | 6138 | 0.012 | 0.2016 | No |
80 | ERG | ERG Entrez,  Source | v-ets erythroblastosis virus E26 oncogene homolog (avian) | 6202 | 0.011 | 0.1980 | No |
81 | BZW2 | BZW2 Entrez,  Source | basic leucine zipper and W2 domains 2 | 6314 | 0.009 | 0.1906 | No |
82 | ENO3 | ENO3 Entrez,  Source | enolase 3 (beta, muscle) | 6328 | 0.009 | 0.1906 | No |
83 | COL3A1 | COL3A1 Entrez,  Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 6389 | 0.009 | 0.1870 | No |
84 | NUDT2 | NUDT2 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 2 | 6461 | 0.008 | 0.1825 | No |
85 | ADD3 | ADD3 Entrez,  Source | adducin 3 (gamma) | 6472 | 0.008 | 0.1825 | No |
86 | LMO4 | LMO4 Entrez,  Source | LIM domain only 4 | 6509 | 0.007 | 0.1806 | No |
87 | LUC7L | LUC7L Entrez,  Source | LUC7-like (S. cerevisiae) | 6518 | 0.007 | 0.1808 | No |
88 | PIK4CA | PIK4CA Entrez,  Source | phosphatidylinositol 4-kinase, catalytic, alpha polypeptide | 6683 | 0.006 | 0.1690 | No |
89 | KCNA3 | KCNA3 Entrez,  Source | potassium voltage-gated channel, shaker-related subfamily, member 3 | 6733 | 0.005 | 0.1658 | No |
90 | PTPRJ | PTPRJ Entrez,  Source | protein tyrosine phosphatase, receptor type, J | 6741 | 0.005 | 0.1658 | No |
91 | HAPLN1 | HAPLN1 Entrez,  Source | hyaluronan and proteoglycan link protein 1 | 6855 | 0.004 | 0.1576 | No |
92 | GNAO1 | GNAO1 Entrez,  Source | guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O | 6883 | 0.003 | 0.1559 | No |
93 | DYRK1A | DYRK1A Entrez,  Source | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | 6964 | 0.002 | 0.1501 | No |
94 | STAT5B | STAT5B Entrez,  Source | signal transducer and activator of transcription 5B | 7024 | 0.002 | 0.1458 | No |
95 | PNOC | PNOC Entrez,  Source | prepronociceptin | 7220 | -0.000 | 0.1311 | No |
96 | DCX | DCX Entrez,  Source | doublecortex; lissencephaly, X-linked (doublecortin) | 7525 | -0.004 | 0.1085 | No |
97 | EGR3 | EGR3 Entrez,  Source | early growth response 3 | 7547 | -0.004 | 0.1074 | No |
98 | TCF1 | TCF1 Entrez,  Source | transcription factor 1, hepatic; LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor | 7936 | -0.009 | 0.0789 | No |
99 | OMG | OMG Entrez,  Source | oligodendrocyte myelin glycoprotein | 8456 | -0.015 | 0.0412 | No |
100 | VGCNL1 | VGCNL1 Entrez,  Source | voltage gated channel like 1 | 8498 | -0.015 | 0.0398 | No |
101 | GRIN2B | GRIN2B Entrez,  Source | glutamate receptor, ionotropic, N-methyl D-aspartate 2B | 8589 | -0.017 | 0.0348 | No |
102 | TRPC6 | TRPC6 Entrez,  Source | transient receptor potential cation channel, subfamily C, member 6 | 8615 | -0.017 | 0.0347 | No |
103 | NFIX | NFIX Entrez,  Source | nuclear factor I/X (CCAAT-binding transcription factor) | 8634 | -0.017 | 0.0352 | No |
104 | CHM | CHM Entrez,  Source | choroideremia (Rab escort protein 1) | 8827 | -0.020 | 0.0227 | No |
105 | QKI | QKI Entrez,  Source | quaking homolog, KH domain RNA binding (mouse) | 8852 | -0.020 | 0.0231 | No |
106 | MBL2 | MBL2 Entrez,  Source | mannose-binding lectin (protein C) 2, soluble (opsonic defect) | 8903 | -0.021 | 0.0215 | No |
107 | ZIC1 | ZIC1 Entrez,  Source | Zic family member 1 (odd-paired homolog, Drosophila) | 8976 | -0.022 | 0.0183 | No |
108 | CSF2 | CSF2 Entrez,  Source | colony stimulating factor 2 (granulocyte-macrophage) | 9237 | -0.025 | 0.0013 | No |
109 | HOXC10 | HOXC10 Entrez,  Source | homeobox C10 | 9359 | -0.027 | -0.0050 | No |
110 | ID2 | ID2 Entrez,  Source | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | 9384 | -0.027 | -0.0039 | No |
111 | STAT3 | STAT3 Entrez,  Source | signal transducer and activator of transcription 3 (acute-phase response factor) | 9416 | -0.028 | -0.0032 | No |
112 | ARF4 | ARF4 Entrez,  Source | ADP-ribosylation factor 4 | 9461 | -0.028 | -0.0035 | No |
113 | POU3F4 | POU3F4 Entrez,  Source | POU domain, class 3, transcription factor 4 | 9521 | -0.029 | -0.0049 | No |
114 | SSTR1 | SSTR1 Entrez,  Source | somatostatin receptor 1 | 9531 | -0.029 | -0.0024 | No |
115 | ATP2A2 | ATP2A2 Entrez,  Source | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 | 9652 | -0.031 | -0.0081 | No |
116 | ST7 | ST7 Entrez,  Source | suppression of tumorigenicity 7 | 9977 | -0.036 | -0.0288 | No |
117 | MYOG | MYOG Entrez,  Source | myogenin (myogenic factor 4) | 10152 | -0.039 | -0.0377 | No |
118 | GFI1 | GFI1 Entrez,  Source | growth factor independent 1 | 10274 | -0.041 | -0.0425 | No |
119 | SPRED1 | SPRED1 Entrez,  Source | sprouty-related, EVH1 domain containing 1 | 10322 | -0.042 | -0.0416 | No |
120 | GPX1 | GPX1 Entrez,  Source | glutathione peroxidase 1 | 10706 | -0.050 | -0.0653 | No |
121 | TINAG | TINAG Entrez,  Source | tubulointerstitial nephritis antigen | 10796 | -0.051 | -0.0665 | No |
122 | SMARCA2 | SMARCA2 Entrez,  Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 10834 | -0.052 | -0.0637 | No |
123 | MXI1 | MXI1 Entrez,  Source | MAX interactor 1 | 10848 | -0.053 | -0.0590 | No |
124 | MOXD1 | MOXD1 Entrez,  Source | monooxygenase, DBH-like 1 | 10970 | -0.055 | -0.0623 | No |
125 | PJA2 | PJA2 Entrez,  Source | praja 2, RING-H2 motif containing | 11072 | -0.057 | -0.0637 | No |
126 | MAP2K5 | MAP2K5 Entrez,  Source | mitogen-activated protein kinase kinase 5 | 11129 | -0.059 | -0.0617 | No |
127 | TLE4 | TLE4 Entrez,  Source | transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) | 11148 | -0.059 | -0.0567 | No |
128 | PRKAG1 | PRKAG1 Entrez,  Source | protein kinase, AMP-activated, gamma 1 non-catalytic subunit | 11774 | -0.078 | -0.0957 | No |
129 | ARHGAP8 | ARHGAP8 Entrez,  Source | Rho GTPase activating protein 8 | 11819 | -0.080 | -0.0904 | No |
130 | APP | APP Entrez,  Source | amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease) | 11831 | -0.081 | -0.0826 | No |
131 | CTBP2 | CTBP2 Entrez,  Source | C-terminal binding protein 2 | 11872 | -0.082 | -0.0768 | No |
132 | SMPX | SMPX Entrez,  Source | small muscle protein, X-linked | 12263 | -0.101 | -0.0956 | No |
133 | TJP2 | TJP2 Entrez,  Source | tight junction protein 2 (zona occludens 2) | 12313 | -0.104 | -0.0881 | No |
134 | PRICKLE1 | PRICKLE1 Entrez,  Source | prickle homolog 1 (Drosophila) | 12357 | -0.107 | -0.0798 | No |
135 | LAMB2 | LAMB2 Entrez,  Source | laminin, beta 2 (laminin S) | 12523 | -0.119 | -0.0795 | No |
136 | RASL11B | RASL11B Entrez,  Source | RAS-like, family 11, member B | 12573 | -0.123 | -0.0700 | No |
137 | VAT1 | VAT1 Entrez,  Source | vesicle amine transport protein 1 homolog (T californica) | 12596 | -0.125 | -0.0582 | No |
138 | PRKG2 | PRKG2 Entrez,  Source | protein kinase, cGMP-dependent, type II | 12729 | -0.138 | -0.0533 | No |
139 | CALD1 | CALD1 Entrez,  Source | caldesmon 1 | 12735 | -0.139 | -0.0388 | No |
140 | PBXIP1 | PBXIP1 Entrez,  Source | pre-B-cell leukemia transcription factor interacting protein 1 | 12745 | -0.140 | -0.0244 | No |
141 | GRK5 | GRK5 Entrez,  Source | G protein-coupled receptor kinase 5 | 12883 | -0.162 | -0.0174 | No |
142 | E2F1 | E2F1 Entrez,  Source | E2F transcription factor 1 | 13022 | -0.195 | -0.0069 | No |
143 | DNAJB4 | DNAJB4 Entrez,  Source | DnaJ (Hsp40) homolog, subfamily B, member 4 | 13193 | -0.289 | 0.0113 | No |