Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | BRCA_PROGNOSIS_POS |
| Enrichment Score (ES) | 0.52681583 |
| Normalized Enrichment Score (NES) | 1.5132881 |
| Nominal p-value | 0.049661398 |
| FDR q-value | 0.11406404 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FBP1 | FBP1 Entrez, Source | fructose-1,6-bisphosphatase 1 | 43 | 0.515 | 0.1603 | Yes |
| 2 | ALDH6A1 | ALDH6A1 Entrez, Source | aldehyde dehydrogenase 6 family, member A1 | 445 | 0.217 | 0.1992 | Yes |
| 3 | PEX12 | PEX12 Entrez, Source | peroxisomal biogenesis factor 12 | 511 | 0.201 | 0.2580 | Yes |
| 4 | PCSK6 | PCSK6 Entrez, Source | proprotein convertase subtilisin/kexin type 6 | 567 | 0.190 | 0.3143 | Yes |
| 5 | CHPT1 | CHPT1 Entrez, Source | choline phosphotransferase 1 | 778 | 0.165 | 0.3507 | Yes |
| 6 | GSTM3 | GSTM3 Entrez, Source | glutathione S-transferase M3 (brain) | 943 | 0.149 | 0.3858 | Yes |
| 7 | FGF18 | FGF18 Entrez, Source | fibroblast growth factor 18 | 1011 | 0.144 | 0.4263 | Yes |
| 8 | PECI | PECI Entrez, Source | peroxisomal D3,D2-enoyl-CoA isomerase | 1151 | 0.133 | 0.4582 | Yes |
| 9 | PDIA4 | PDIA4 Entrez, Source | protein disulfide isomerase family A, member 4 | 1197 | 0.130 | 0.4962 | Yes |
| 10 | QDPR | QDPR Entrez, Source | quinoid dihydropteridine reductase | 1560 | 0.110 | 0.5040 | Yes |
| 11 | FUT8 | FUT8 Entrez, Source | fucosyltransferase 8 (alpha (1,6) fucosyltransferase) | 1701 | 0.105 | 0.5268 | Yes |
| 12 | RBP3 | RBP3 Entrez, Source | retinol binding protein 3, interstitial | 2917 | 0.068 | 0.4573 | No |
| 13 | BTG2 | BTG2 Entrez, Source | BTG family, member 2 | 4648 | 0.035 | 0.3386 | No |
| 14 | WISP1 | WISP1 Entrez, Source | WNT1 inducible signaling pathway protein 1 | 5743 | 0.018 | 0.2622 | No |
| 15 | EVL | EVL Entrez, Source | Enah/Vasp-like | 5854 | 0.016 | 0.2592 | No |
| 16 | ACADS | ACADS Entrez, Source | acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain | 5886 | 0.016 | 0.2619 | No |
| 17 | TBX3 | TBX3 Entrez, Source | T-box 3 (ulnar mammary syndrome) | 6476 | 0.007 | 0.2198 | No |
| 18 | PIB5PA | PIB5PA Entrez, Source | phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A | 6537 | 0.006 | 0.2172 | No |
| 19 | RPS4X | RPS4X Entrez, Source | ribosomal protein S4, X-linked | 7462 | -0.007 | 0.1500 | No |
| 20 | BBC3 | BBC3 Entrez, Source | BCL2 binding component 3 | 10518 | -0.065 | -0.0589 | No |
| 21 | NEO1 | NEO1 Entrez, Source | neogenin homolog 1 (chicken) | 11629 | -0.106 | -0.1087 | No |
| 22 | CIRBP | CIRBP Entrez, Source | cold inducible RNA binding protein | 11805 | -0.114 | -0.0856 | No |
| 23 | AP2B1 | AP2B1 Entrez, Source | adaptor-related protein complex 2, beta 1 subunit | 12345 | -0.152 | -0.0777 | No |
| 24 | TGFB3 | TGFB3 Entrez, Source | transforming growth factor, beta 3 | 13210 | -0.480 | 0.0099 | No |
