Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_72h_versus_single_gel_72h.class.cls
#double_gel_72h_versus_single_gel_72h_repos
Phenotypeclass.cls#double_gel_72h_versus_single_gel_72h_repos
Upregulated in classdouble_gel_72h
GeneSetCARBOXYLIC_ACID_METABOLIC_PROCESS
Enrichment Score (ES)0.63622004
Normalized Enrichment Score (NES)2.5111248
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CARBOXYLIC_ACID_METABOLIC_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 590.7790.0360Yes
2BBOX1BBOX1
Entrez,  Source
butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1130.7400.0706Yes
3FTCDFTCD
Entrez,  Source
formiminotransferase cyclodeaminase150.7310.1049Yes
4GLYATGLYAT
Entrez,  Source
glycine-N-acyltransferase330.5540.1298Yes
5HACL1HACL1
Entrez,  Source
2-hydroxyacyl-CoA lyase 1540.4880.1512Yes
6CDO1CDO1
Entrez,  Source
cysteine dioxygenase, type I580.4840.1738Yes
7ACOX2ACOX2
Entrez,  Source
acyl-Coenzyme A oxidase 2, branched chain950.4190.1908Yes
8GOT1GOT1
Entrez,  Source
glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)1100.4030.2087Yes
9HGDHGD
Entrez,  Source
homogentisate 1,2-dioxygenase (homogentisate oxidase)1260.3850.2257Yes
10AGXTAGXT
Entrez,  Source
alanine-glyoxylate aminotransferase (oxalosis I; hyperoxaluria I; glycolicaciduria; serine-pyruvate aminotransferase)1280.3840.2436Yes
11GCKGCK
Entrez,  Source
glucokinase (hexokinase 4, maturity onset diabetes of the young 2)1400.3680.2601Yes
12ARG1ARG1
Entrez,  Source
arginase, liver1450.3580.2767Yes
13FADS2FADS2
Entrez,  Source
fatty acid desaturase 21820.3240.2892Yes
14ASLASL
Entrez,  Source
argininosuccinate lyase1830.3230.3045Yes
15ACLYACLY
Entrez,  Source
ATP citrate lyase2120.3050.3167Yes
16FAHFAH
Entrez,  Source
fumarylacetoacetate hydrolase (fumarylacetoacetase)2190.2990.3303Yes
17PFKFB1PFKFB1
Entrez,  Source
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 12300.2930.3434Yes
18AS3MTAS3MT
Entrez,  Source
arsenic (+3 oxidation state) methyltransferase2420.2890.3561Yes
19NR1H4NR1H4
Entrez,  Source
nuclear receptor subfamily 1, group H, member 42460.2880.3695Yes
20ACN9ACN9
Entrez,  Source
ACN9 homolog (S. cerevisiae)2840.2730.3795Yes
21GAMTGAMT
Entrez,  Source
guanidinoacetate N-methyltransferase2950.2670.3913Yes
22MAT1AMAT1A
Entrez,  Source
methionine adenosyltransferase I, alpha3150.2620.4022Yes
23SLC7A7SLC7A7
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 73200.2600.4142Yes
24GLS2GLS2
Entrez,  Source
glutaminase 2 (liver, mitochondrial)3410.2520.4245Yes
25SLC25A10SLC25A10
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 103780.2400.4331Yes
26MSRAMSRA
Entrez,  Source
methionine sulfoxide reductase A4280.2220.4398Yes
27SC4MOLSC4MOL
Entrez,  Source
sterol-C4-methyl oxidase-like4440.2180.4489Yes
28ALDH6A1ALDH6A1
Entrez,  Source
aldehyde dehydrogenase 6 family, member A14450.2170.4591Yes
29SCLYSCLY
Entrez,  Source
selenocysteine lyase4540.2140.4686Yes
30ALDH1L1ALDH1L1
Entrez,  Source
aldehyde dehydrogenase 1 family, member L14650.2110.4778Yes
31ACADVLACADVL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, very long chain4820.2070.4864Yes
32HAO2HAO2
Entrez,  Source
hydroxyacid oxidase 2 (long chain)5360.1950.4915Yes
33FAAHFAAH
Entrez,  Source
fatty acid amide hydrolase5530.1920.4993Yes
34SLC25A15SLC25A15
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 155950.1860.5050Yes
35BAATBAAT
Entrez,  Source
bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase)5970.1860.5137Yes
36GNEGNE
Entrez,  Source
glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase5990.1860.5224Yes
37ALDH5A1ALDH5A1
Entrez,  Source
aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)6120.1840.5302Yes
38ACOT12ACOT12
Entrez,  Source
acyl-CoA thioesterase 126190.1840.5384Yes
39PAHPAH
Entrez,  Source
phenylalanine hydroxylase6280.1820.5464Yes
40ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial6330.1820.5546Yes
41BCKDHBBCKDHB
Entrez,  Source
branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)6510.1790.5618Yes
42BCKDHABCKDHA
Entrez,  Source
branched chain keto acid dehydrogenase E1, alpha polypeptide6620.1780.5694Yes
43SLC7A2SLC7A2
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 27760.1650.5686Yes
44ME1ME1
Entrez,  Source
malic enzyme 1, NADP(+)-dependent, cytosolic8000.1630.5745Yes
45GCSHGCSH
Entrez,  Source
glycine cleavage system protein H (aminomethyl carrier)8160.1610.5809Yes
46GCLCGCLC
Entrez,  Source
glutamate-cysteine ligase, catalytic subunit8230.1600.5880Yes
47BCKDKBCKDK
Entrez,  Source
branched chain ketoacid dehydrogenase kinase8680.1560.5920Yes
48CYP4F2CYP4F2
Entrez,  Source
cytochrome P450, family 4, subfamily F, polypeptide 29330.1500.5943Yes
49UGDHUGDH
Entrez,  Source
UDP-glucose dehydrogenase9510.1490.6000Yes
50YARSYARS
Entrez,  Source
tyrosyl-tRNA synthetase9840.1460.6045Yes
51CPT1ACPT1A
Entrez,  Source
carnitine palmitoyltransferase 1A (liver)10460.1400.6064Yes
52PECIPECI
Entrez,  Source
peroxisomal D3,D2-enoyl-CoA isomerase11510.1330.6049Yes
53PPARAPPARA
Entrez,  Source
peroxisome proliferative activated receptor, alpha12520.1270.6032Yes
54PPARDPPARD
Entrez,  Source
peroxisome proliferative activated receptor, delta13870.1190.5987Yes
55AMTAMT
Entrez,  Source
aminomethyltransferase13970.1190.6036Yes
56IGF1IGF1
Entrez,  Source
insulin-like growth factor 1 (somatomedin C)14710.1150.6035Yes
57ACADSBACADSB
Entrez,  Source
acyl-Coenzyme A dehydrogenase, short/branched chain14800.1140.6083Yes
58IDH1IDH1
Entrez,  Source
isocitrate dehydrogenase 1 (NADP+), soluble14940.1140.6126Yes
59FADS1FADS1
Entrez,  Source
fatty acid desaturase 114950.1140.6180Yes
60CD74CD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain15240.1120.6211Yes
61HDCHDC
Entrez,  Source
histidine decarboxylase15270.1120.6263Yes
62QDPRQDPR
Entrez,  Source
quinoid dihydropteridine reductase15600.1100.6290Yes
63ASRGL1ASRGL1
Entrez,  Source
asparaginase like 116120.1080.6303Yes
64NANPNANP
Entrez,  Source
N-acetylneuraminic acid phosphatase16480.1070.6326Yes
65MLYCDMLYCD
Entrez,  Source
malonyl-CoA decarboxylase16780.1060.6354Yes
66ASPAASPA
Entrez,  Source
aspartoacylase (Canavan disease)17330.1040.6362Yes
67GCLMGCLM
Entrez,  Source
glutamate-cysteine ligase, modifier subunit18400.1000.6329No
68AKR1D1AKR1D1
Entrez,  Source
aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)18590.0990.6362No
69ABCD2ABCD2
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 219260.0960.6357No
70NFS1NFS1
Entrez,  Source
NFS1 nitrogen fixation 1 (S. cerevisiae)21000.0910.6269No
71ADI1ADI1
Entrez,  Source
acireductone dioxygenase 121590.0890.6267No
72ACO1ACO1
Entrez,  Source
aconitase 1, soluble22590.0860.6233No
73PTSPTS
Entrez,  Source
6-pyruvoyltetrahydropterin synthase24070.0820.6160No
74CPT1BCPT1B
Entrez,  Source
carnitine palmitoyltransferase 1B (muscle)24960.0800.6131No
75ADIPOR2ADIPOR2
Entrez,  Source
adiponectin receptor 225980.0760.6091No
76IDH3BIDH3B
Entrez,  Source
isocitrate dehydrogenase 3 (NAD+) beta26480.0750.6089No
77ACOX3ACOX3
Entrez,  Source
acyl-Coenzyme A oxidase 3, pristanoyl30460.0660.5820No
78ATF4ATF4
Entrez,  Source
activating transcription factor 4 (tax-responsive enhancer element B67)30580.0650.5842No
79TNFRSF1ATNFRSF1A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1A30630.0650.5870No
80ACO2ACO2
Entrez,  Source
aconitase 2, mitochondrial31360.0640.5845No
81GNPATGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase33980.0580.5675No
82MCCC2MCCC2
Entrez,  Source
methylcrotonoyl-Coenzyme A carboxylase 2 (beta)35170.0560.5612No
83ACOT2ACOT2
Entrez,  Source
acyl-CoA thioesterase 236420.0530.5543No
84GGTLA1GGTLA1
Entrez,  Source
gamma-glutamyltransferase-like activity 137150.0520.5512No
85GSSGSS
Entrez,  Source
glutathione synthetase40110.0460.5311No
86AGPAT1AGPAT1
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)40280.0460.5320No
87GAD1GAD1
Entrez,  Source
glutamate decarboxylase 1 (brain, 67kDa)41620.0440.5240No
88AARSAARS
Entrez,  Source
alanyl-tRNA synthetase42750.0420.5175No
89ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain42990.0410.5177No
90BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset43260.0410.5177No
91HPDHPD
Entrez,  Source
4-hydroxyphenylpyruvate dioxygenase43830.0400.5153No
92SLC7A5SLC7A5
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 544700.0380.5106No
93HADHBHADHB
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit46750.0350.4968No
94HPGDHPGD
Entrez,  Source
hydroxyprostaglandin dehydrogenase 15-(NAD)48030.0320.4887No
95PTGS1PTGS1
Entrez,  Source
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)48870.0310.4839No
96ARPP-19ARPP-19
Entrez,  Source
-50200.0290.4752No
97GLUD1GLUD1
Entrez,  Source
glutamate dehydrogenase 150870.0280.4715No
98PTGESPTGES
Entrez,  Source
prostaglandin E synthase56020.0200.4336No
99ECH1ECH1
Entrez,  Source
enoyl Coenzyme A hydratase 1, peroxisomal58590.0160.4150No
100ACADSACADS
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain58860.0160.4138No
101GOT2GOT2
Entrez,  Source
glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)59160.0150.4123No
102SCYE1SCYE1
Entrez,  Source
small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)60400.0140.4036No
103DARSDARS
Entrez,  Source
aspartyl-tRNA synthetase64780.0070.3709No
104GGT1GGT1
Entrez,  Source
gamma-glutamyltransferase 164890.0070.3704No
105PTGDSPTGDS
Entrez,  Source
prostaglandin D2 synthase 21kDa (brain)67380.0030.3518No
106KARSKARS
Entrez,  Source
lysyl-tRNA synthetase7266-0.0040.3121No
107GBA2GBA2
Entrez,  Source
glucosidase, beta (bile acid) 27269-0.0040.3122No
108SLC3A1SLC3A1
Entrez,  Source
17374-0.0060.3045No
109PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha8036-0.0150.2552No
110HSD3B7HSD3B7
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 78089-0.0160.2521No
111SLC7A8SLC7A8
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 88292-0.0200.2377No
112ADIPOR1ADIPOR1
Entrez,  Source
adiponectin receptor 18460-0.0220.2261No
113SDSSDS
Entrez,  Source
serine dehydratase8683-0.0260.2105No
114INDOINDO
Entrez,  Source
indoleamine-pyrrole 2,3 dioxygenase9012-0.0320.1872No
115CYP7B1CYP7B1
Entrez,  Source
cytochrome P450, family 7, subfamily B, polypeptide 19114-0.0340.1812No
116FARS2FARS2
Entrez,  Source
phenylalanine-tRNA synthetase 2 (mitochondrial)9209-0.0360.1758No
117MIFMIF
Entrez,  Source
macrophage migration inhibitory factor (glycosylation-inhibiting factor)9316-0.0380.1696No
118SLC7A9SLC7A9
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 99816-0.0480.1341No
119LTA4HLTA4H
Entrez,  Source
leukotriene A4 hydrolase10430-0.0620.0906No
120GAD2GAD2
Entrez,  Source
glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)10797-0.0720.0663No
121WARSWARS
Entrez,  Source
tryptophanyl-tRNA synthetase10801-0.0730.0695No
122DEGS1DEGS1
Entrez,  Source
degenerative spermatocyte homolog 1, lipid desaturase (Drosophila)11324-0.0920.0343No
123GATMGATM
Entrez,  Source
glycine amidinotransferase (L-arginine:glycine amidinotransferase)11580-0.1030.0199No
124CROTCROT
Entrez,  Source
carnitine O-octanoyltransferase11691-0.1090.0166No
125PLOD1PLOD1
Entrez,  Source
procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 112626-0.189-0.0452No
126DDAH2DDAH2
Entrez,  Source
dimethylarginine dimethylaminohydrolase 212900-0.253-0.0539No
127LYPLA3LYPLA3
Entrez,  Source
lysophospholipase 3 (lysosomal phospholipase A2)12939-0.266-0.0443No
128SLC6A6SLC6A6
Entrez,  Source
solute carrier family 6 (neurotransmitter transporter, taurine), member 613097-0.354-0.0395No
129DDAH1DDAH1
Entrez,  Source
dimethylarginine dimethylaminohydrolase 113118-0.367-0.0237No
130SMSSMS
Entrez,  Source
spermine synthase13163-0.420-0.0073No
131BCAT1BCAT1
Entrez,  Source
branched chain aminotransferase 1, cytosolic13181-0.4420.0122No
Table: GSEA details [plain text format]



Fig 2: CARBOXYLIC_ACID_METABOLIC_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CARBOXYLIC_ACID_METABOLIC_PROCESS: Random ES distribution   
Gene set null distribution of ES for CARBOXYLIC_ACID_METABOLIC_PROCESS