Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_72h_versus_single_gel_72h.class.cls
#double_gel_72h_versus_single_gel_72h_repos
Phenotypeclass.cls#double_gel_72h_versus_single_gel_72h_repos
Upregulated in classdouble_gel_72h
GeneSetCELLULAR_LIPID_METABOLIC_PROCESS
Enrichment Score (ES)0.41687414
Normalized Enrichment Score (NES)1.6985707
Nominal p-value0.002967359
FDR q-value0.03647462
FWER p-Value0.999
Table: GSEA Results Summary



Fig 1: Enrichment plot: CELLULAR_LIPID_METABOLIC_PROCESS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PEMTPEMT
Entrez,  Source
phosphatidylethanolamine N-methyltransferase80.7980.0412Yes
2SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 590.7790.0821Yes
3GLYATGLYAT
Entrez,  Source
glycine-N-acyltransferase330.5540.1094Yes
4HACL1HACL1
Entrez,  Source
2-hydroxyacyl-CoA lyase 1540.4880.1335Yes
5ACOX2ACOX2
Entrez,  Source
acyl-Coenzyme A oxidase 2, branched chain950.4190.1524Yes
6NR0B2NR0B2
Entrez,  Source
nuclear receptor subfamily 0, group B, member 21040.4160.1736Yes
7APOMAPOM
Entrez,  Source
apolipoprotein M1130.4010.1940Yes
8IDI1IDI1
Entrez,  Source
isopentenyl-diphosphate delta isomerase 11360.3720.2119Yes
9LCATLCAT
Entrez,  Source
lecithin-cholesterol acyltransferase1420.3650.2306Yes
10FADS2FADS2
Entrez,  Source
fatty acid desaturase 21820.3240.2447Yes
11NR1H4NR1H4
Entrez,  Source
nuclear receptor subfamily 1, group H, member 42460.2880.2550Yes
12SC4MOLSC4MOL
Entrez,  Source
sterol-C4-methyl oxidase-like4440.2180.2515Yes
13FDPSFDPS
Entrez,  Source
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)4620.2120.2613Yes
14ACADVLACADVL
Entrez,  Source
acyl-Coenzyme A dehydrogenase, very long chain4820.2070.2707Yes
15DGAT2DGAT2
Entrez,  Source
diacylglycerol O-acyltransferase homolog 2 (mouse)5030.2010.2798Yes
16HAO2HAO2
Entrez,  Source
hydroxyacid oxidase 2 (long chain)5360.1950.2875Yes
17FAAHFAAH
Entrez,  Source
fatty acid amide hydrolase5530.1920.2964Yes
18MVKMVK
Entrez,  Source
mevalonate kinase (mevalonic aciduria)5780.1880.3044Yes
19BAATBAAT
Entrez,  Source
bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase)5970.1860.3128Yes
20ALDH5A1ALDH5A1
Entrez,  Source
aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)6120.1840.3215Yes
21ACOT12ACOT12
Entrez,  Source
acyl-CoA thioesterase 126190.1840.3306Yes
22ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial6330.1820.3392Yes
23DHCR24DHCR24
Entrez,  Source
24-dehydrocholesterol reductase6850.1750.3445Yes
24DHCR7DHCR7
Entrez,  Source
7-dehydrocholesterol reductase6930.1740.3531Yes
25PCYT2PCYT2
Entrez,  Source
phosphate cytidylyltransferase 2, ethanolamine7480.1680.3578Yes
26CHPT1CHPT1
Entrez,  Source
choline phosphotransferase 17780.1650.3642Yes
27NR1I2NR1I2
Entrez,  Source
nuclear receptor subfamily 1, group I, member 28550.1570.3667Yes
28CYP4F2CYP4F2
Entrez,  Source
cytochrome P450, family 4, subfamily F, polypeptide 29330.1500.3687Yes
29AKR1B10AKR1B10
Entrez,  Source
aldo-keto reductase family 1, member B10 (aldose reductase)10440.1410.3678Yes
30CPT1ACPT1A
Entrez,  Source
carnitine palmitoyltransferase 1A (liver)10460.1400.3751Yes
31PECIPECI
Entrez,  Source
peroxisomal D3,D2-enoyl-CoA isomerase11510.1330.3742Yes
32ST8SIA1ST8SIA1
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 112230.1280.3755Yes
33SMPD3SMPD3
Entrez,  Source
sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)12320.1280.3816Yes
34PPARAPPARA
Entrez,  Source
peroxisome proliferative activated receptor, alpha12520.1270.3868Yes
35PI4K2A13290.1230.3875Yes
36NSDHLNSDHL
Entrez,  Source
NAD(P) dependent steroid dehydrogenase-like13700.1210.3907Yes
37PPARDPPARD
Entrez,  Source
peroxisome proliferative activated receptor, delta13870.1190.3958Yes
38ACADSBACADSB
Entrez,  Source
acyl-Coenzyme A dehydrogenase, short/branched chain14800.1140.3948Yes
39FADS1FADS1
Entrez,  Source
fatty acid desaturase 114950.1140.3997Yes
40RARRES2RARRES2
Entrez,  Source
retinoic acid receptor responder (tazarotene induced) 215010.1130.4052Yes
41CD74CD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain15240.1120.4094Yes
42SCP2SCP2
Entrez,  Source
sterol carrier protein 216320.1070.4070Yes
43MLYCDMLYCD
Entrez,  Source
malonyl-CoA decarboxylase16780.1060.4091Yes
44PLA2G2DPLA2G2D
Entrez,  Source
phospholipase A2, group IID17340.1040.4104Yes
45B4GALNT1B4GALNT1
Entrez,  Source
beta-1,4-N-acetyl-galactosaminyl transferase 117690.1020.4131Yes
46AKR1D1AKR1D1
Entrez,  Source
aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)18590.0990.4116Yes
47BMP6BMP6
Entrez,  Source
bone morphogenetic protein 618770.0980.4155Yes
48ABCD2ABCD2
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 219260.0960.4169Yes
49RDH11RDH11
Entrez,  Source
retinol dehydrogenase 11 (all-trans/9-cis/11-cis)20690.0920.4109No
50APOC3APOC3
Entrez,  Source
apolipoprotein C-III21760.0890.4075No
51DHRS3DHRS3
Entrez,  Source
dehydrogenase/reductase (SDR family) member 323530.0840.3986No
52CPT1BCPT1B
Entrez,  Source
carnitine palmitoyltransferase 1B (muscle)24960.0800.3920No
53ADIPOR2ADIPOR2
Entrez,  Source
adiponectin receptor 225980.0760.3884No
54PLA2G6PLA2G6
Entrez,  Source
phospholipase A2, group VI (cytosolic, calcium-independent)26150.0760.3911No
55ST6GALNAC6ST6GALNAC6
Entrez,  Source
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 626720.0740.3908No
56PLCB2PLCB2
Entrez,  Source
phospholipase C, beta 227820.0720.3863No
57PEX7PEX7
Entrez,  Source
peroxisomal biogenesis factor 730290.0660.3711No
58ACOX3ACOX3
Entrez,  Source
acyl-Coenzyme A oxidase 3, pristanoyl30460.0660.3733No
59TNFRSF1ATNFRSF1A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1A30630.0650.3755No
60PLA2G5PLA2G5
Entrez,  Source
phospholipase A2, group V33010.0600.3607No
61GNPATGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase33980.0580.3564No
62ST8SIA5ST8SIA5
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 536250.0530.3421No
63ACOT2ACOT2
Entrez,  Source
acyl-CoA thioesterase 236420.0530.3437No
64PIGKPIGK
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class K38140.0500.3333No
65AGPAT1AGPAT1
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)40280.0460.3195No
66APOA1APOA1
Entrez,  Source
apolipoprotein A-I41690.0430.3112No
67HDLBPHDLBP
Entrez,  Source
high density lipoprotein binding protein (vigilin)42700.0420.3058No
68ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain42990.0410.3059No
69BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset43260.0410.3060No
70PIGCPIGC
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class C43380.0400.3073No
71HSD11B2HSD11B2
Entrez,  Source
hydroxysteroid (11-beta) dehydrogenase 245420.0370.2939No
72HADHBHADHB
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit46750.0350.2857No
73PIK3R1PIK3R1
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha)47600.0330.2810No
74HPGDHPGD
Entrez,  Source
hydroxyprostaglandin dehydrogenase 15-(NAD)48030.0320.2796No
75DHRS9DHRS9
Entrez,  Source
dehydrogenase/reductase (SDR family) member 948650.0310.2766No
76PTGS1PTGS1
Entrez,  Source
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)48870.0310.2766No
77CLN8CLN8
Entrez,  Source
ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)49360.0300.2746No
78HSD3B1HSD3B1
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 149970.0290.2715No
79DGAT1DGAT1
Entrez,  Source
diacylglycerol O-acyltransferase homolog 1 (mouse)51180.0270.2639No
80CLN3CLN3
Entrez,  Source
ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)52080.0260.2585No
81GPX4GPX4
Entrez,  Source
glutathione peroxidase 4 (phospholipid hydroperoxidase)53730.0240.2473No
82CNBPCNBP
Entrez,  Source
CCHC-type zinc finger, nucleic acid binding protein54380.0230.2436No
83MBTPS2MBTPS2
Entrez,  Source
membrane-bound transcription factor peptidase, site 255660.0210.2351No
84PTGESPTGES
Entrez,  Source
prostaglandin E synthase56020.0200.2335No
85PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)57200.0180.2256No
86ST3GAL6ST3GAL6
Entrez,  Source
ST3 beta-galactoside alpha-2,3-sialyltransferase 657450.0180.2247No
87APOA5APOA5
Entrez,  Source
apolipoprotein A-V58150.0170.2204No
88ECH1ECH1
Entrez,  Source
enoyl Coenzyme A hydratase 1, peroxisomal58590.0160.2180No
89ACADSACADS
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain58860.0160.2169No
90AGPSAGPS
Entrez,  Source
alkylglycerone phosphate synthase60790.0130.2030No
91SPTLC1SPTLC1
Entrez,  Source
serine palmitoyltransferase, long chain base subunit 161120.0130.2012No
92PCYT1BPCYT1B
Entrez,  Source
phosphate cytidylyltransferase 1, choline, beta61860.0120.1963No
93FDXRFDXR
Entrez,  Source
ferredoxin reductase63910.0080.1812No
94ST8SIA3ST8SIA3
Entrez,  Source
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 364570.0070.1767No
95IL4IL4
Entrez,  Source
interleukin 464660.0070.1764No
96CYP19A1CYP19A1
Entrez,  Source
cytochrome P450, family 19, subfamily A, polypeptide 165960.0050.1669No
97PTGDSPTGDS
Entrez,  Source
prostaglandin D2 synthase 21kDa (brain)67380.0030.1564No
98PRDX6PRDX6
Entrez,  Source
peroxiredoxin 667680.0030.1544No
99ST6GALNAC4ST6GALNAC4
Entrez,  Source
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 469680.0000.1393No
100IHPK2IHPK2
Entrez,  Source
inositol hexaphosphate kinase 27190-0.0030.1227No
101GBA2GBA2
Entrez,  Source
glucosidase, beta (bile acid) 27269-0.0040.1170No
102NEU3NEU3
Entrez,  Source
sialidase 3 (membrane sialidase)7444-0.0070.1042No
103PLAAPLAA
Entrez,  Source
phospholipase A2-activating protein7627-0.0090.0909No
104SERINC1SERINC1
Entrez,  Source
serine incorporator 17788-0.0120.0793No
105SOD1SOD1
Entrez,  Source
superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))7883-0.0130.0729No
106PIGVPIGV
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class V7912-0.0140.0715No
107PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha8036-0.0150.0630No
108RETSATRETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)8072-0.0160.0612No
109HSD3B7HSD3B7
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 78089-0.0160.0608No
110SULT2A1SULT2A1
Entrez,  Source
sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 18105-0.0160.0605No
111PPAP2APPAP2A
Entrez,  Source
phosphatidic acid phosphatase type 2A8226-0.0180.0524No
112ADIPOR1ADIPOR1
Entrez,  Source
adiponectin receptor 18460-0.0220.0359No
113DPM2DPM2
Entrez,  Source
dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit8478-0.0230.0358No
114STUB1STUB1
Entrez,  Source
STIP1 homology and U-box containing protein 18548-0.0240.0318No
115CYP7B1CYP7B1
Entrez,  Source
cytochrome P450, family 7, subfamily B, polypeptide 19114-0.034-0.0092No
116PIGSPIGS
Entrez,  Source
phosphatidylinositol glycan anchor biosynthesis, class S9263-0.037-0.0185No
117MIFMIF
Entrez,  Source
macrophage migration inhibitory factor (glycosylation-inhibiting factor)9316-0.038-0.0205No
118PPT1PPT1
Entrez,  Source
palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile)9419-0.040-0.0261No
119ASAH2ASAH2
Entrez,  Source
N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 29653-0.045-0.0414No
120SMPD2SMPD2
Entrez,  Source
sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)9756-0.047-0.0467No
121NR0B1NR0B1
Entrez,  Source
nuclear receptor subfamily 0, group B, member 19783-0.047-0.0462No
122IMPA1IMPA1
Entrez,  Source
inositol(myo)-1(or 4)-monophosphatase 19804-0.048-0.0452No
123PSAPPSAP
Entrez,  Source
prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)9922-0.051-0.0514No
124B4GALT4B4GALT4
Entrez,  Source
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 49970-0.052-0.0523No
125PLCD1PLCD1
Entrez,  Source
phospholipase C, delta 110095-0.054-0.0588No
126CYP11A1CYP11A1
Entrez,  Source
cytochrome P450, family 11, subfamily A, polypeptide 110102-0.054-0.0564No
127LTA4HLTA4H
Entrez,  Source
leukotriene A4 hydrolase10430-0.062-0.0780No
128PNLIPRP2PNLIPRP2
Entrez,  Source
pancreatic lipase-related protein 210564-0.066-0.0846No
129CELCEL
Entrez,  Source
carboxyl ester lipase (bile salt-stimulated lipase)10808-0.073-0.0992No
130LPLLPL
Entrez,  Source
lipoprotein lipase10988-0.078-0.1087No
131YWHAHYWHAH
Entrez,  Source
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide10999-0.079-0.1053No
132TSPOTSPO
Entrez,  Source
translocator protein (18kDa)11004-0.079-0.1015No
133CD81CD81
Entrez,  Source
CD81 molecule11022-0.079-0.0986No
134IHPK1IHPK1
Entrez,  Source
inositol hexaphosphate kinase 111145-0.083-0.1035No
135PIP5K1APIP5K1A
Entrez,  Source
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha11170-0.084-0.1009No
136STSSTS
Entrez,  Source
steroid sulfatase (microsomal), arylsulfatase C, isozyme S11277-0.089-0.1042No
137DEGS1DEGS1
Entrez,  Source
degenerative spermatocyte homolog 1, lipid desaturase (Drosophila)11324-0.092-0.1029No
138SCARB1SCARB1
Entrez,  Source
scavenger receptor class B, member 111498-0.099-0.1108No
139SHHSHH
Entrez,  Source
sonic hedgehog homolog (Drosophila)11581-0.103-0.1116No
140CROTCROT
Entrez,  Source
carnitine O-octanoyltransferase11691-0.109-0.1142No
141NPC2NPC2
Entrez,  Source
Niemann-Pick disease, type C212096-0.131-0.1380No
142AGPAT6AGPAT6
Entrez,  Source
1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)12308-0.149-0.1461No
143ASAH1ASAH1
Entrez,  Source
N-acylsphingosine amidohydrolase (acid ceramidase) 112353-0.153-0.1414No
144SGPL1SGPL1
Entrez,  Source
sphingosine-1-phosphate lyase 112434-0.162-0.1390No
145SPHK1SPHK1
Entrez,  Source
sphingosine kinase 112507-0.172-0.1355No
146PLA1APLA1A
Entrez,  Source
phospholipase A1 member A12708-0.206-0.1398No
147UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase12906-0.254-0.1414No
148LYPLA3LYPLA3
Entrez,  Source
lysophospholipase 3 (lysosomal phospholipase A2)12939-0.266-0.1299No
149PLCE1PLCE1
Entrez,  Source
phospholipase C, epsilon 113110-0.363-0.1237No
150ABCG1ABCG1
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 113162-0.417-0.1057No
151SERINC5SERINC5
Entrez,  Source
serine incorporator 513225-0.503-0.0840No
152SERINC2SERINC2
Entrez,  Source
serine incorporator 213234-0.520-0.0574No
153SOAT1SOAT1
Entrez,  Source
sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 113248-0.551-0.0295No
154ADMADM
Entrez,  Source
adrenomedullin13287-0.6970.0042No
Table: GSEA details [plain text format]



Fig 2: CELLULAR_LIPID_METABOLIC_PROCESS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CELLULAR_LIPID_METABOLIC_PROCESS: Random ES distribution   
Gene set null distribution of ES for CELLULAR_LIPID_METABOLIC_PROCESS