Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | single_gel_72h |
| GeneSet | CROMER_HYPOPHARYNGEAL_MET_VS_NON_DN |
| Enrichment Score (ES) | -0.677285 |
| Normalized Enrichment Score (NES) | -2.0511727 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.003096861 |
| FWER p-Value | 0.065 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | AFG3L2 | AFG3L2 Entrez, Source | AFG3 ATPase family gene 3-like 2 (yeast) | 1242 | 0.127 | -0.0737 | No |
| 2 | PA2G4 | PA2G4 Entrez, Source | proliferation-associated 2G4, 38kDa | 2235 | 0.087 | -0.1348 | No |
| 3 | PRODH | PRODH Entrez, Source | proline dehydrogenase (oxidase) 1 | 2331 | 0.084 | -0.1289 | No |
| 4 | EPAS1 | EPAS1 Entrez, Source | endothelial PAS domain protein 1 | 2628 | 0.076 | -0.1394 | No |
| 5 | FLNB | FLNB Entrez, Source | filamin B, beta (actin binding protein 278) | 2930 | 0.068 | -0.1515 | No |
| 6 | SDC4 | SDC4 Entrez, Source | syndecan 4 (amphiglycan, ryudocan) | 3350 | 0.059 | -0.1738 | No |
| 7 | ZC3H8 | ZC3H8 Entrez, Source | zinc finger CCCH-type containing 8 | 3376 | 0.059 | -0.1666 | No |
| 8 | ATP5A1 | ATP5A1 Entrez, Source | ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle | 3850 | 0.049 | -0.1946 | No |
| 9 | FXYD3 | FXYD3 Entrez, Source | FXYD domain containing ion transport regulator 3 | 5167 | 0.027 | -0.2894 | No |
| 10 | ATP5D | ATP5D Entrez, Source | ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit | 5323 | 0.024 | -0.2973 | No |
| 11 | ST6GALNAC2 | ST6GALNAC2 Entrez, Source | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 | 5559 | 0.021 | -0.3117 | No |
| 12 | TNNT3 | TNNT3 Entrez, Source | troponin T type 3 (skeletal, fast) | 6538 | 0.006 | -0.3843 | No |
| 13 | KLK10 | KLK10 Entrez, Source | kallikrein 10 | 7247 | -0.004 | -0.4369 | No |
| 14 | PLEC1 | PLEC1 Entrez, Source | plectin 1, intermediate filament binding protein 500kDa | 7482 | -0.007 | -0.4534 | No |
| 15 | SLC20A2 | SLC20A2 Entrez, Source | solute carrier family 20 (phosphate transporter), member 2 | 9081 | -0.034 | -0.5684 | No |
| 16 | VDAC3 | VDAC3 Entrez, Source | voltage-dependent anion channel 3 | 9603 | -0.043 | -0.6008 | No |
| 17 | SERPINB5 | SERPINB5 Entrez, Source | serpin peptidase inhibitor, clade B (ovalbumin), member 5 | 9769 | -0.047 | -0.6059 | No |
| 18 | ALDOA | ALDOA Entrez, Source | aldolase A, fructose-bisphosphate | 9779 | -0.047 | -0.5992 | No |
| 19 | HSPA2 | HSPA2 Entrez, Source | heat shock 70kDa protein 2 | 10104 | -0.054 | -0.6152 | No |
| 20 | MALL | MALL Entrez, Source | mal, T-cell differentiation protein-like | 10181 | -0.056 | -0.6122 | No |
| 21 | PSMD8 | PSMD8 Entrez, Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 | 10537 | -0.065 | -0.6288 | No |
| 22 | CKB | CKB Entrez, Source | creatine kinase, brain | 10604 | -0.067 | -0.6234 | No |
| 23 | VSNL1 | VSNL1 Entrez, Source | visinin-like 1 | 10633 | -0.068 | -0.6149 | No |
| 24 | BMP1 | BMP1 Entrez, Source | bone morphogenetic protein 1 | 10796 | -0.072 | -0.6159 | No |
| 25 | SH3GL1 | SH3GL1 Entrez, Source | SH3-domain GRB2-like 1 | 11182 | -0.085 | -0.6317 | No |
| 26 | DUSP7 | DUSP7 Entrez, Source | dual specificity phosphatase 7 | 11512 | -0.100 | -0.6409 | No |
| 27 | BAIAP2 | BAIAP2 Entrez, Source | BAI1-associated protein 2 | 11997 | -0.125 | -0.6580 | Yes |
| 28 | JUP | JUP Entrez, Source | junction plakoglobin | 12003 | -0.125 | -0.6389 | Yes |
| 29 | IMPA2 | IMPA2 Entrez, Source | inositol(myo)-1(or 4)-monophosphatase 2 | 12041 | -0.127 | -0.6220 | Yes |
| 30 | LMNA | LMNA Entrez, Source | lamin A/C | 12083 | -0.130 | -0.6049 | Yes |
| 31 | KLF5 | KLF5 Entrez, Source | Kruppel-like factor 5 (intestinal) | 12107 | -0.132 | -0.5862 | Yes |
| 32 | ITGB4 | ITGB4 Entrez, Source | integrin, beta 4 | 12348 | -0.153 | -0.5805 | Yes |
| 33 | PPP4C | PPP4C Entrez, Source | protein phosphatase 4 (formerly X), catalytic subunit | 12360 | -0.154 | -0.5575 | Yes |
| 34 | SMTN | SMTN Entrez, Source | smoothelin | 12423 | -0.161 | -0.5372 | Yes |
| 35 | GJB3 | GJB3 Entrez, Source | gap junction protein, beta 3, 31kDa (connexin 31) | 12502 | -0.171 | -0.5165 | Yes |
| 36 | CAV2 | CAV2 Entrez, Source | caveolin 2 | 12694 | -0.203 | -0.4994 | Yes |
| 37 | DTX2 | DTX2 Entrez, Source | deltex homolog 2 (Drosophila) | 12845 | -0.236 | -0.4741 | Yes |
| 38 | S100A11 | S100A11 Entrez, Source | S100 calcium binding protein A11 | 13099 | -0.355 | -0.4381 | Yes |
| 39 | PFKP | PFKP Entrez, Source | phosphofructokinase, platelet | 13129 | -0.381 | -0.3812 | Yes |
| 40 | RAB31 | RAB31 Entrez, Source | RAB31, member RAS oncogene family | 13187 | -0.451 | -0.3155 | Yes |
| 41 | TPBG | TPBG Entrez, Source | trophoblast glycoprotein | 13238 | -0.524 | -0.2380 | Yes |
| 42 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 13340 | -1.586 | 0.0002 | Yes |
