Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | single_gel_72h |
| GeneSet | GCAAAAA,MIR-129 |
| Enrichment Score (ES) | -0.547383 |
| Normalized Enrichment Score (NES) | -1.8944812 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.021326974 |
| FWER p-Value | 0.608 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | LPHN3 | LPHN3 Entrez, Source | latrophilin 3 | 2198 | 0.088 | -0.1563 | No |
| 2 | CBX7 | CBX7 Entrez, Source | chromobox homolog 7 | 2229 | 0.087 | -0.1491 | No |
| 3 | NR4A2 | NR4A2 Entrez, Source | nuclear receptor subfamily 4, group A, member 2 | 2245 | 0.086 | -0.1409 | No |
| 4 | PRKCB1 | PRKCB1 Entrez, Source | protein kinase C, beta 1 | 2401 | 0.082 | -0.1437 | No |
| 5 | SFMBT1 | SFMBT1 Entrez, Source | Scm-like with four mbt domains 1 | 2477 | 0.080 | -0.1406 | No |
| 6 | AMD1 | AMD1 Entrez, Source | adenosylmethionine decarboxylase 1 | 2566 | 0.078 | -0.1389 | No |
| 7 | NRXN2 | NRXN2 Entrez, Source | neurexin 2 | 2585 | 0.077 | -0.1319 | No |
| 8 | PITPNB | PITPNB Entrez, Source | phosphatidylinositol transfer protein, beta | 2877 | 0.070 | -0.1463 | No |
| 9 | FNDC5 | FNDC5 Entrez, Source | fibronectin type III domain containing 5 | 2938 | 0.068 | -0.1435 | No |
| 10 | ARNT | ARNT Entrez, Source | aryl hydrocarbon receptor nuclear translocator | 3368 | 0.059 | -0.1695 | No |
| 11 | NRG2 | NRG2 Entrez, Source | neuregulin 2 | 3401 | 0.058 | -0.1656 | No |
| 12 | CACNG2 | CACNG2 Entrez, Source | calcium channel, voltage-dependent, gamma subunit 2 | 3514 | 0.056 | -0.1681 | No |
| 13 | SH3KBP1 | SH3KBP1 Entrez, Source | SH3-domain kinase binding protein 1 | 3572 | 0.054 | -0.1665 | No |
| 14 | ACSL4 | ACSL4 Entrez, Source | acyl-CoA synthetase long-chain family member 4 | 3612 | 0.053 | -0.1636 | No |
| 15 | RPS6KB1 | RPS6KB1 Entrez, Source | ribosomal protein S6 kinase, 70kDa, polypeptide 1 | 3665 | 0.053 | -0.1619 | No |
| 16 | TMEM23 | TMEM23 Entrez, Source | transmembrane protein 23 | 3767 | 0.050 | -0.1640 | No |
| 17 | TAOK3 | TAOK3 Entrez, Source | TAO kinase 3 | 3984 | 0.047 | -0.1753 | No |
| 18 | DAB2IP | DAB2IP Entrez, Source | DAB2 interacting protein | 4122 | 0.044 | -0.1808 | No |
| 19 | PAX6 | PAX6 Entrez, Source | paired box gene 6 (aniridia, keratitis) | 4359 | 0.040 | -0.1943 | No |
| 20 | PTP4A1 | PTP4A1 Entrez, Source | protein tyrosine phosphatase type IVA, member 1 | 4387 | 0.040 | -0.1920 | No |
| 21 | TBC1D15 | TBC1D15 Entrez, Source | TBC1 domain family, member 15 | 4388 | 0.040 | -0.1877 | No |
| 22 | PIK3R1 | PIK3R1 Entrez, Source | phosphoinositide-3-kinase, regulatory subunit 1 (p85 alpha) | 4760 | 0.033 | -0.2121 | No |
| 23 | STAT5B | STAT5B Entrez, Source | signal transducer and activator of transcription 5B | 4806 | 0.032 | -0.2120 | No |
| 24 | HOXC10 | HOXC10 Entrez, Source | homeobox C10 | 5188 | 0.026 | -0.2379 | No |
| 25 | XKR4 | XKR4 Entrez, Source | XK, Kell blood group complex subunit-related family, member 4 | 5653 | 0.020 | -0.2708 | No |
| 26 | HERC4 | HERC4 Entrez, Source | hect domain and RLD 4 | 5658 | 0.019 | -0.2690 | No |
| 27 | CUGBP2 | CUGBP2 Entrez, Source | CUG triplet repeat, RNA binding protein 2 | 5853 | 0.017 | -0.2819 | No |
| 28 | SP4 | SP4 Entrez, Source | Sp4 transcription factor | 5973 | 0.015 | -0.2893 | No |
| 29 | GALNT1 | GALNT1 Entrez, Source | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) | 6034 | 0.014 | -0.2923 | No |
| 30 | ARL5A | ARL5A Entrez, Source | ADP-ribosylation factor-like 5A | 6062 | 0.013 | -0.2929 | No |
| 31 | HNRPA1 | HNRPA1 Entrez, Source | heterogeneous nuclear ribonucleoprotein A1 | 6063 | 0.013 | -0.2915 | No |
| 32 | SP3 | SP3 Entrez, Source | Sp3 transcription factor | 6515 | 0.006 | -0.3248 | No |
| 33 | NR2C2 | NR2C2 Entrez, Source | nuclear receptor subfamily 2, group C, member 2 | 6625 | 0.005 | -0.3325 | No |
| 34 | DDX3X | DDX3X Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked | 6818 | 0.002 | -0.3468 | No |
| 35 | NR3C2 | NR3C2 Entrez, Source | nuclear receptor subfamily 3, group C, member 2 | 6857 | 0.002 | -0.3494 | No |
| 36 | PSMA7 | PSMA7 Entrez, Source | proteasome (prosome, macropain) subunit, alpha type, 7 | 6888 | 0.001 | -0.3515 | No |
| 37 | STOX2 | STOX2 Entrez, Source | storkhead box 2 | 6975 | 0.000 | -0.3580 | No |
| 38 | KCTD1 | KCTD1 Entrez, Source | potassium channel tetramerisation domain containing 1 | 7291 | -0.005 | -0.3813 | No |
| 39 | GNAZ | GNAZ Entrez, Source | guanine nucleotide binding protein (G protein), alpha z polypeptide | 7605 | -0.009 | -0.4039 | No |
| 40 | CIB2 | CIB2 Entrez, Source | calcium and integrin binding family member 2 | 7716 | -0.011 | -0.4111 | No |
| 41 | VPS26A | VPS26A Entrez, Source | vacuolar protein sorting 26 homolog A (yeast) | 7970 | -0.015 | -0.4286 | No |
| 42 | EPHA8 | EPHA8 Entrez, Source | EPH receptor A8 | 8006 | -0.015 | -0.4296 | No |
| 43 | MATR3 | MATR3 Entrez, Source | matrin 3 | 8066 | -0.016 | -0.4323 | No |
| 44 | HMGB1 | HMGB1 Entrez, Source | high-mobility group box 1 | 8508 | -0.023 | -0.4631 | No |
| 45 | EPHB1 | EPHB1 Entrez, Source | EPH receptor B1 | 8589 | -0.025 | -0.4665 | No |
| 46 | ISL1 | ISL1 Entrez, Source | ISL1 transcription factor, LIM/homeodomain, (islet-1) | 8698 | -0.026 | -0.4718 | No |
| 47 | PPP1R12A | PPP1R12A Entrez, Source | protein phosphatase 1, regulatory (inhibitor) subunit 12A | 8798 | -0.028 | -0.4762 | No |
| 48 | OXR1 | OXR1 Entrez, Source | oxidation resistance 1 | 8815 | -0.028 | -0.4743 | No |
| 49 | GRM7 | GRM7 Entrez, Source | glutamate receptor, metabotropic 7 | 8939 | -0.031 | -0.4803 | No |
| 50 | VCP | VCP Entrez, Source | valosin-containing protein | 9139 | -0.035 | -0.4915 | No |
| 51 | SBK1 | SBK1 Entrez, Source | SH3-binding domain kinase 1 | 9155 | -0.035 | -0.4889 | No |
| 52 | FMR1 | FMR1 Entrez, Source | fragile X mental retardation 1 | 9448 | -0.041 | -0.5065 | No |
| 53 | ESRRG | ESRRG Entrez, Source | estrogen-related receptor gamma | 9512 | -0.042 | -0.5067 | No |
| 54 | PHF12 | PHF12 Entrez, Source | PHD finger protein 12 | 9531 | -0.042 | -0.5035 | No |
| 55 | ZBTB10 | ZBTB10 Entrez, Source | zinc finger and BTB domain containing 10 | 9765 | -0.047 | -0.5160 | No |
| 56 | PITPNA | PITPNA Entrez, Source | phosphatidylinositol transfer protein, alpha | 9808 | -0.048 | -0.5140 | No |
| 57 | APC | APC Entrez, Source | adenomatosis polyposis coli | 9845 | -0.049 | -0.5114 | No |
| 58 | SLC25A27 | SLC25A27 Entrez, Source | solute carrier family 25, member 27 | 9880 | -0.049 | -0.5087 | No |
| 59 | NPEPPS | NPEPPS Entrez, Source | aminopeptidase puromycin sensitive | 9910 | -0.050 | -0.5054 | No |
| 60 | HNRPK | HNRPK Entrez, Source | heterogeneous nuclear ribonucleoprotein K | 10138 | -0.055 | -0.5166 | No |
| 61 | ILF3 | ILF3 Entrez, Source | interleukin enhancer binding factor 3, 90kDa | 10199 | -0.057 | -0.5149 | No |
| 62 | ATP2B4 | ATP2B4 Entrez, Source | ATPase, Ca++ transporting, plasma membrane 4 | 10340 | -0.060 | -0.5190 | No |
| 63 | DLGAP2 | DLGAP2 Entrez, Source | discs, large (Drosophila) homolog-associated protein 2 | 10712 | -0.070 | -0.5394 | Yes |
| 64 | ING3 | ING3 Entrez, Source | inhibitor of growth family, member 3 | 10772 | -0.072 | -0.5361 | Yes |
| 65 | SLC17A6 | SLC17A6 Entrez, Source | solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 | 10897 | -0.075 | -0.5373 | Yes |
| 66 | YWHAH | YWHAH Entrez, Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide | 10999 | -0.079 | -0.5365 | Yes |
| 67 | EP300 | EP300 Entrez, Source | E1A binding protein p300 | 11002 | -0.079 | -0.5281 | Yes |
| 68 | ZFP36L1 | ZFP36L1 Entrez, Source | zinc finger protein 36, C3H type-like 1 | 11158 | -0.084 | -0.5307 | Yes |
| 69 | SCN8A | SCN8A Entrez, Source | sodium channel, voltage gated, type VIII, alpha | 11201 | -0.086 | -0.5246 | Yes |
| 70 | MYT1L | MYT1L Entrez, Source | myelin transcription factor 1-like | 11504 | -0.100 | -0.5366 | Yes |
| 71 | PAPOLB | PAPOLB Entrez, Source | poly(A) polymerase beta (testis specific) | 11529 | -0.101 | -0.5275 | Yes |
| 72 | RAB21 | RAB21 Entrez, Source | RAB21, member RAS oncogene family | 11573 | -0.103 | -0.5196 | Yes |
| 73 | ABCC5 | ABCC5 Entrez, Source | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 | 11735 | -0.111 | -0.5198 | Yes |
| 74 | BTBD10 | BTBD10 Entrez, Source | BTB (POZ) domain containing 10 | 11913 | -0.119 | -0.5203 | Yes |
| 75 | LMNA | LMNA Entrez, Source | lamin A/C | 12083 | -0.130 | -0.5189 | Yes |
| 76 | GFRA2 | GFRA2 Entrez, Source | GDNF family receptor alpha 2 | 12105 | -0.132 | -0.5063 | Yes |
| 77 | BMPR2 | BMPR2 Entrez, Source | bone morphogenetic protein receptor, type II (serine/threonine kinase) | 12152 | -0.135 | -0.4952 | Yes |
| 78 | SYT1 | SYT1 Entrez, Source | synaptotagmin I | 12373 | -0.155 | -0.4950 | Yes |
| 79 | RBMS1 | RBMS1 Entrez, Source | RNA binding motif, single stranded interacting protein 1 | 12691 | -0.203 | -0.4969 | Yes |
| 80 | NIPBL | NIPBL Entrez, Source | Nipped-B homolog (Drosophila) | 12794 | -0.223 | -0.4805 | Yes |
| 81 | PLCG1 | PLCG1 Entrez, Source | phospholipase C, gamma 1 | 12798 | -0.224 | -0.4565 | Yes |
| 82 | ITGA6 | ITGA6 Entrez, Source | integrin, alpha 6 | 12855 | -0.239 | -0.4349 | Yes |
| 83 | ETS1 | ETS1 Entrez, Source | v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) | 12930 | -0.262 | -0.4121 | Yes |
| 84 | TRIO | TRIO Entrez, Source | triple functional domain (PTPRF interacting) | 12955 | -0.274 | -0.3842 | Yes |
| 85 | CXCL5 | CXCL5 Entrez, Source | chemokine (C-X-C motif) ligand 5 | 12997 | -0.289 | -0.3561 | Yes |
| 86 | RUNX1 | RUNX1 Entrez, Source | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | 13073 | -0.336 | -0.3254 | Yes |
| 87 | PTPRZ1 | PTPRZ1 Entrez, Source | protein tyrosine phosphatase, receptor-type, Z polypeptide 1 | 13074 | -0.336 | -0.2891 | Yes |
| 88 | JAG1 | JAG1 Entrez, Source | jagged 1 (Alagille syndrome) | 13192 | -0.458 | -0.2484 | Yes |
| 89 | PDLIM5 | PDLIM5 Entrez, Source | PDZ and LIM domain 5 | 13261 | -0.575 | -0.1912 | Yes |
| 90 | ACTN1 | ACTN1 Entrez, Source | actinin, alpha 1 | 13279 | -0.655 | -0.1216 | Yes |
| 91 | MARCKSL1 | MARCKSL1 Entrez, Source | MARCKS-like 1 | 13330 | -1.167 | 0.0009 | Yes |
