Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | single_gel_72h |
| GeneSet | HCC_SURVIVAL_GOOD_VS_POOR_DN |
| Enrichment Score (ES) | -0.7138477 |
| Normalized Enrichment Score (NES) | -2.4149961 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | SLC34A1 | SLC34A1 Entrez, Source | solute carrier family 34 (sodium phosphate), member 1 | 881 | 0.155 | -0.0522 | No |
| 2 | NOL5A | NOL5A Entrez, Source | nucleolar protein 5A (56kDa with KKE/D repeat) | 2257 | 0.086 | -0.1480 | No |
| 3 | ATP5C1 | ATP5C1 Entrez, Source | ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 | 2437 | 0.082 | -0.1540 | No |
| 4 | CSDA | CSDA Entrez, Source | cold shock domain protein A | 2927 | 0.068 | -0.1846 | No |
| 5 | MYH2 | MYH2 Entrez, Source | myosin, heavy chain 2, skeletal muscle, adult | 2937 | 0.068 | -0.1790 | No |
| 6 | RPL36A | RPL36A Entrez, Source | ribosomal protein L36a | 2987 | 0.067 | -0.1766 | No |
| 7 | PELI1 | PELI1 Entrez, Source | pellino homolog 1 (Drosophila) | 3195 | 0.062 | -0.1864 | No |
| 8 | USP1 | USP1 Entrez, Source | ubiquitin specific peptidase 1 | 3790 | 0.050 | -0.2266 | No |
| 9 | OPLAH | OPLAH Entrez, Source | 5-oxoprolinase (ATP-hydrolysing) | 4069 | 0.045 | -0.2434 | No |
| 10 | LYAR | LYAR Entrez, Source | - | 4619 | 0.036 | -0.2816 | No |
| 11 | RWDD1 | RWDD1 Entrez, Source | RWD domain containing 1 | 4687 | 0.034 | -0.2834 | No |
| 12 | RPL35 | RPL35 Entrez, Source | ribosomal protein L35 | 4821 | 0.032 | -0.2905 | No |
| 13 | BZW2 | BZW2 Entrez, Source | basic leucine zipper and W2 domains 2 | 4979 | 0.029 | -0.2996 | No |
| 14 | ATP2B1 | ATP2B1 Entrez, Source | ATPase, Ca++ transporting, plasma membrane 1 | 5439 | 0.023 | -0.3322 | No |
| 15 | ODC1 | ODC1 Entrez, Source | ornithine decarboxylase 1 | 5487 | 0.022 | -0.3337 | No |
| 16 | FBL | FBL Entrez, Source | fibrillarin | 5673 | 0.019 | -0.3459 | No |
| 17 | CD164 | CD164 Entrez, Source | CD164 molecule, sialomucin | 5676 | 0.019 | -0.3443 | No |
| 18 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 5968 | 0.015 | -0.3649 | No |
| 19 | HNRPA1 | HNRPA1 Entrez, Source | heterogeneous nuclear ribonucleoprotein A1 | 6063 | 0.013 | -0.3708 | No |
| 20 | RPS18 | RPS18 Entrez, Source | ribosomal protein S18 | 6172 | 0.012 | -0.3778 | No |
| 21 | RPS3A | RPS3A Entrez, Source | ribosomal protein S3A | 6320 | 0.009 | -0.3881 | No |
| 22 | RPS9 | RPS9 Entrez, Source | ribosomal protein S9 | 6448 | 0.007 | -0.3970 | No |
| 23 | CCT6A | CCT6A Entrez, Source | chaperonin containing TCP1, subunit 6A (zeta 1) | 6535 | 0.006 | -0.4029 | No |
| 24 | RPS3 | RPS3 Entrez, Source | ribosomal protein S3 | 6546 | 0.006 | -0.4031 | No |
| 25 | RPL31 | RPL31 Entrez, Source | ribosomal protein L31 | 6641 | 0.005 | -0.4098 | No |
| 26 | RPL27 | RPL27 Entrez, Source | ribosomal protein L27 | 6890 | 0.001 | -0.4283 | No |
| 27 | NPM1 | NPM1 Entrez, Source | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | 7074 | -0.001 | -0.4420 | No |
| 28 | RPL9 | RPL9 Entrez, Source | ribosomal protein L9 | 7163 | -0.003 | -0.4484 | No |
| 29 | RPS5 | RPS5 Entrez, Source | ribosomal protein S5 | 7405 | -0.006 | -0.4660 | No |
| 30 | RPL17 | RPL17 Entrez, Source | ribosomal protein L17 | 7426 | -0.006 | -0.4669 | No |
| 31 | RPS6 | RPS6 Entrez, Source | ribosomal protein S6 | 7886 | -0.013 | -0.5003 | No |
| 32 | RBX1 | RBX1 Entrez, Source | ring-box 1 | 8219 | -0.018 | -0.5237 | No |
| 33 | RALA | RALA Entrez, Source | v-ral simian leukemia viral oncogene homolog A (ras related) | 8799 | -0.028 | -0.5647 | No |
| 34 | YWHAB | YWHAB Entrez, Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide | 8834 | -0.029 | -0.5647 | No |
| 35 | TES | TES Entrez, Source | testis derived transcript (3 LIM domains) | 8843 | -0.029 | -0.5626 | No |
| 36 | NSF | NSF Entrez, Source | N-ethylmaleimide-sensitive factor | 8958 | -0.031 | -0.5683 | No |
| 37 | HNRPC | HNRPC Entrez, Source | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 8965 | -0.032 | -0.5659 | No |
| 38 | BUB3 | BUB3 Entrez, Source | BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) | 8998 | -0.032 | -0.5653 | No |
| 39 | CCT5 | CCT5 Entrez, Source | chaperonin containing TCP1, subunit 5 (epsilon) | 9022 | -0.033 | -0.5641 | No |
| 40 | RAN | RAN Entrez, Source | RAN, member RAS oncogene family | 9203 | -0.036 | -0.5744 | No |
| 41 | IER3 | IER3 Entrez, Source | immediate early response 3 | 9311 | -0.038 | -0.5789 | No |
| 42 | FABP5 | FABP5 Entrez, Source | fatty acid binding protein 5 (psoriasis-associated) | 9829 | -0.048 | -0.6135 | No |
| 43 | MARCKS | MARCKS Entrez, Source | myristoylated alanine-rich protein kinase C substrate | 10092 | -0.054 | -0.6282 | No |
| 44 | HMGN1 | HMGN1 Entrez, Source | high-mobility group nucleosome binding domain 1 | 10290 | -0.059 | -0.6377 | No |
| 45 | NAP1L1 | NAP1L1 Entrez, Source | nucleosome assembly protein 1-like 1 | 10934 | -0.076 | -0.6791 | No |
| 46 | YWHAH | YWHAH Entrez, Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide | 10999 | -0.079 | -0.6768 | No |
| 47 | LXN | LXN Entrez, Source | latexin | 11080 | -0.081 | -0.6753 | No |
| 48 | HDAC2 | HDAC2 Entrez, Source | histone deacetylase 2 | 11317 | -0.091 | -0.6847 | No |
| 49 | KHDRBS1 | KHDRBS1 Entrez, Source | KH domain containing, RNA binding, signal transduction associated 1 | 11520 | -0.100 | -0.6908 | No |
| 50 | KIF5B | KIF5B Entrez, Source | kinesin family member 5B | 11531 | -0.101 | -0.6823 | No |
| 51 | DEK | DEK Entrez, Source | DEK oncogene (DNA binding) | 11951 | -0.122 | -0.7027 | Yes |
| 52 | ITPR3 | ITPR3 Entrez, Source | inositol 1,4,5-triphosphate receptor, type 3 | 12002 | -0.125 | -0.6950 | Yes |
| 53 | ACTR3 | ACTR3 Entrez, Source | ARP3 actin-related protein 3 homolog (yeast) | 12015 | -0.126 | -0.6843 | Yes |
| 54 | ANXA4 | ANXA4 Entrez, Source | annexin A4 | 12040 | -0.127 | -0.6744 | Yes |
| 55 | KLF5 | KLF5 Entrez, Source | Kruppel-like factor 5 (intestinal) | 12107 | -0.132 | -0.6673 | Yes |
| 56 | MAPRE1 | MAPRE1 Entrez, Source | microtubule-associated protein, RP/EB family, member 1 | 12109 | -0.132 | -0.6552 | Yes |
| 57 | DUSP18 | DUSP18 Entrez, Source | dual specificity phosphatase 18 | 12139 | -0.133 | -0.6452 | Yes |
| 58 | CBX3 | CBX3 Entrez, Source | chromobox homolog 3 (HP1 gamma homolog, Drosophila) | 12246 | -0.143 | -0.6400 | Yes |
| 59 | CDK4 | CDK4 Entrez, Source | cyclin-dependent kinase 4 | 12272 | -0.146 | -0.6285 | Yes |
| 60 | CTBP2 | CTBP2 Entrez, Source | C-terminal binding protein 2 | 12294 | -0.147 | -0.6166 | Yes |
| 61 | CALM2 | CALM2 Entrez, Source | calmodulin 2 (phosphorylase kinase, delta) | 12340 | -0.152 | -0.6060 | Yes |
| 62 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 12413 | -0.160 | -0.5968 | Yes |
| 63 | HIF1A | HIF1A Entrez, Source | hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | 12528 | -0.175 | -0.5893 | Yes |
| 64 | ROD1 | ROD1 Entrez, Source | ROD1 regulator of differentiation 1 (S. pombe) | 12593 | -0.184 | -0.5772 | Yes |
| 65 | YWHAQ | YWHAQ Entrez, Source | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide | 12601 | -0.184 | -0.5608 | Yes |
| 66 | TMSB4X | TMSB4X Entrez, Source | thymosin, beta 4, X-linked | 12920 | -0.259 | -0.5610 | Yes |
| 67 | PTMA | PTMA Entrez, Source | prothymosin, alpha (gene sequence 28) | 12957 | -0.275 | -0.5384 | Yes |
| 68 | HN1 | HN1 Entrez, Source | hematological and neurological expressed 1 | 13029 | -0.307 | -0.5156 | Yes |
| 69 | ANXA3 | ANXA3 Entrez, Source | annexin A3 | 13069 | -0.331 | -0.4882 | Yes |
| 70 | CCNB1 | CCNB1 Entrez, Source | cyclin B1 | 13131 | -0.385 | -0.4575 | Yes |
| 71 | S100A6 | S100A6 Entrez, Source | S100 calcium binding protein A6 | 13165 | -0.424 | -0.4211 | Yes |
| 72 | CLIC1 | CLIC1 Entrez, Source | chloride intracellular channel 1 | 13167 | -0.426 | -0.3821 | Yes |
| 73 | BCAT1 | BCAT1 Entrez, Source | branched chain aminotransferase 1, cytosolic | 13181 | -0.442 | -0.3425 | Yes |
| 74 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13267 | -0.614 | -0.2925 | Yes |
| 75 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 13280 | -0.659 | -0.2329 | Yes |
| 76 | SERPINH1 | SERPINH1 Entrez, Source | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) | 13290 | -0.708 | -0.1686 | Yes |
| 77 | CCNA2 | CCNA2 Entrez, Source | cyclin A2 | 13314 | -0.890 | -0.0886 | Yes |
| 78 | RGS2 | RGS2 Entrez, Source | regulator of G-protein signalling 2, 24kDa | 13321 | -0.988 | 0.0016 | Yes |
