Details for gene set HCC_SURVIVAL_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos
Phenotype	class.cls#double_gel_72h_versus_single_gel_72h_repos
Upregulated in class	double_gel_72h
GeneSet	HCC_SURVIVAL_GOOD_VS_POOR_UP
Enrichment Score (ES)	0.7287434
Normalized Enrichment Score (NES)	2.7799962
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EHHADH	EHHADH Entrez, Source	enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase	6	0.908	0.0495	Yes
2	SLC27A5	SLC27A5 Entrez, Source	solute carrier family 27 (fatty acid transporter), member 5	9	0.779	0.0922	Yes
3	PKLR	PKLR Entrez, Source	pyruvate kinase, liver and RBC	31	0.561	0.1215	Yes
4	GLYAT	GLYAT Entrez, Source	glycine-N-acyltransferase	33	0.554	0.1519	Yes
5	AQP9	AQP9 Entrez, Source	aquaporin 9	38	0.530	0.1807	Yes
6	OTC	OTC Entrez, Source	ornithine carbamoyltransferase	44	0.506	0.2082	Yes
7	CDO1	CDO1 Entrez, Source	cysteine dioxygenase, type I	58	0.484	0.2338	Yes
8	C4BPB	C4BPB Entrez, Source	complement component 4 binding protein, beta	65	0.477	0.2596	Yes
9	DPYS	DPYS Entrez, Source	dihydropyrimidinase	90	0.425	0.2812	Yes
10	SERPIND1	SERPIND1 Entrez, Source	serpin peptidase inhibitor, clade D (heparin cofactor), member 1	92	0.424	0.3045	Yes
11	KHK	KHK Entrez, Source	ketohexokinase (fructokinase)	93	0.422	0.3277	Yes
12	ACOX2	ACOX2 Entrez, Source	acyl-Coenzyme A oxidase 2, branched chain	95	0.419	0.3507	Yes
13	CES1	CES1 Entrez, Source	carboxylesterase 1 (monocyte/macrophage serine esterase 1)	118	0.394	0.3707	Yes
14	HGD	HGD Entrez, Source	homogentisate 1,2-dioxygenase (homogentisate oxidase)	126	0.385	0.3913	Yes
15	G6PC	G6PC Entrez, Source	glucose-6-phosphatase, catalytic subunit	129	0.383	0.4123	Yes
16	LPIN1	LPIN1 Entrez, Source	lipin 1	133	0.378	0.4329	Yes
17	PC	PC Entrez, Source	pyruvate carboxylase	155	0.347	0.4504	Yes
18	ASGR1	ASGR1 Entrez, Source	asialoglycoprotein receptor 1	189	0.319	0.4655	Yes
19	AOX1	AOX1 Entrez, Source	aldehyde oxidase 1	201	0.309	0.4816	Yes
20	CPT2	CPT2 Entrez, Source	carnitine palmitoyltransferase II	207	0.307	0.4981	Yes
21	CABC1	CABC1 Entrez, Source	chaperone, ABC1 activity of bc1 complex homolog (S. pombe)	217	0.301	0.5140	Yes
22	IL6R	IL6R Entrez, Source	interleukin 6 receptor	264	0.281	0.5260	Yes
23	F10	F10 Entrez, Source	coagulation factor X	342	0.251	0.5340	Yes
24	SLC38A3	SLC38A3 Entrez, Source	solute carrier family 38, member 3	357	0.245	0.5465	Yes
25	ABCG5	ABCG5 Entrez, Source	ATP-binding cassette, sub-family G (WHITE), member 5 (sterolin 1)	367	0.244	0.5592	Yes
26	SLC25A10	SLC25A10 Entrez, Source	solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10	378	0.240	0.5716	Yes
27	ALAS1	ALAS1 Entrez, Source	aminolevulinate, delta-, synthase 1	419	0.224	0.5810	Yes
28	MSRA	MSRA Entrez, Source	methionine sulfoxide reductase A	428	0.222	0.5926	Yes
29	INSIG1	INSIG1 Entrez, Source	insulin induced gene 1	485	0.207	0.5997	Yes
30	MVK	MVK Entrez, Source	mevalonate kinase (mevalonic aciduria)	578	0.188	0.6032	Yes
31	TTPA	TTPA Entrez, Source	tocopherol (alpha) transfer protein (ataxia (Friedreich-like) with vitamin E deficiency)	581	0.188	0.6133	Yes
32	BAAT	BAAT Entrez, Source	bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase)	597	0.186	0.6225	Yes
33	NDRG2	NDRG2 Entrez, Source	NDRG family member 2	610	0.185	0.6317	Yes
34	PAH	PAH Entrez, Source	phenylalanine hydroxylase	628	0.182	0.6405	Yes
35	ECHS1	ECHS1 Entrez, Source	enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	633	0.182	0.6502	Yes
36	SERPINC1	SERPINC1 Entrez, Source	serpin peptidase inhibitor, clade C (antithrombin), member 1	690	0.175	0.6556	Yes
37	MASP2	MASP2 Entrez, Source	mannan-binding lectin serine peptidase 2	718	0.171	0.6630	Yes
38	INSR	INSR Entrez, Source	insulin receptor	735	0.169	0.6710	Yes
39	MRPL46	MRPL46 Entrez, Source	mitochondrial ribosomal protein L46	743	0.168	0.6798	Yes
40	PCYT2	PCYT2 Entrez, Source	phosphate cytidylyltransferase 2, ethanolamine	748	0.168	0.6887	Yes
41	HAGH	HAGH Entrez, Source	hydroxyacylglutathione hydrolase	819	0.161	0.6922	Yes
42	CRYL1	CRYL1 Entrez, Source	crystallin, lambda 1	919	0.151	0.6931	Yes
43	ACF	ACF Entrez, Source	-	983	0.146	0.6964	Yes
44	STARD10	STARD10 Entrez, Source	START domain containing 10	999	0.145	0.7032	Yes
45	DCXR	DCXR Entrez, Source	dicarbonyl/L-xylulose reductase	1010	0.144	0.7104	Yes
46	SLC6A12	SLC6A12 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	1019	0.143	0.7177	Yes
47	HADH2	HADH2 Entrez, Source	hydroxyacyl-Coenzyme A dehydrogenase, type II	1095	0.137	0.7196	Yes
48	AMACR	AMACR Entrez, Source	alpha-methylacyl-CoA racemase	1143	0.134	0.7234	Yes
49	CES3	CES3 Entrez, Source	carboxylesterase 3 (brain)	1183	0.131	0.7277	Yes
50	GJB1	GJB1 Entrez, Source	gap junction protein, beta 1, 32kDa (connexin 32, Charcot-Marie-Tooth neuropathy, X-linked)	1293	0.124	0.7263	Yes
51	AMT	AMT Entrez, Source	aminomethyltransferase	1397	0.119	0.7250	Yes
52	SEC14L2	SEC14L2 Entrez, Source	SEC14-like 2 (S. cerevisiae)	1434	0.117	0.7287	Yes
53	F12	F12 Entrez, Source	coagulation factor XII (Hageman factor)	1808	0.101	0.7061	No
54	APOC3	APOC3 Entrez, Source	apolipoprotein C-III	2176	0.089	0.6833	No
55	FMO3	FMO3 Entrez, Source	flavin containing monooxygenase 3	2322	0.084	0.6770	No
56	SERPINF1	SERPINF1 Entrez, Source	serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1	2345	0.084	0.6800	No
57	SLC2A2	SLC2A2 Entrez, Source	solute carrier family 2 (facilitated glucose transporter), member 2	2459	0.081	0.6759	No
58	MST1	MST1 Entrez, Source	macrophage stimulating 1 (hepatocyte growth factor-like)	2514	0.079	0.6762	No
59	SRD5A1	SRD5A1 Entrez, Source	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	2561	0.078	0.6770	No
60	ZP3	ZP3 Entrez, Source	zona pellucida glycoprotein 3 (sperm receptor)	2988	0.067	0.6485	No
61	NDUFS2	NDUFS2 Entrez, Source	NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	3172	0.063	0.6382	No
62	SERPING1	SERPING1 Entrez, Source	serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)	3307	0.060	0.6314	No
63	PCCB	PCCB Entrez, Source	propionyl Coenzyme A carboxylase, beta polypeptide	3417	0.058	0.6263	No
64	EPHX1	EPHX1 Entrez, Source	epoxide hydrolase 1, microsomal (xenobiotic)	4104	0.045	0.5770	No
65	CPB2	CPB2 Entrez, Source	carboxypeptidase B2 (plasma, carboxypeptidase U)	4145	0.044	0.5764	No
66	APCS	APCS Entrez, Source	amyloid P component, serum	4201	0.043	0.5746	No
67	HPD	HPD Entrez, Source	4-hydroxyphenylpyruvate dioxygenase	4383	0.040	0.5631	No
68	IVD	IVD Entrez, Source	isovaleryl Coenzyme A dehydrogenase	4783	0.033	0.5348	No
69	EGLN2	EGLN2 Entrez, Source	egl nine homolog 2 (C. elegans)	5283	0.025	0.4985	No
70	CES2	CES2 Entrez, Source	carboxylesterase 2 (intestine, liver)	5418	0.023	0.4896	No
71	APOA5	APOA5 Entrez, Source	apolipoprotein A-V	5815	0.017	0.4607	No
72	ACADS	ACADS Entrez, Source	acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain	5886	0.016	0.4563	No
73	PCK1	PCK1 Entrez, Source	phosphoenolpyruvate carboxykinase 1 (soluble)	6026	0.014	0.4466	No
74	PRDX6	PRDX6 Entrez, Source	peroxiredoxin 6	6768	0.003	0.3908	No
75	ITPR2	ITPR2 Entrez, Source	inositol 1,4,5-triphosphate receptor, type 2	7164	-0.003	0.3611	No
76	MYRIP	MYRIP Entrez, Source	myosin VIIA and Rab interacting protein	7534	-0.008	0.3337	No
77	ABHD6	ABHD6 Entrez, Source	abhydrolase domain containing 6	7579	-0.009	0.3309	No
78	SULT2A1	SULT2A1 Entrez, Source	sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	8105	-0.016	0.2921	No
79	PPAP2A	PPAP2A Entrez, Source	phosphatidic acid phosphatase type 2A	8226	-0.018	0.2841	No
80	ABCG8	ABCG8 Entrez, Source	ATP-binding cassette, sub-family G (WHITE), member 8 (sterolin 2)	10112	-0.055	0.1448	No
81	WNT11	WNT11 Entrez, Source	wingless-type MMTV integration site family, member 11	10113	-0.055	0.1478	No
82	CYP3A4	CYP3A4 Entrez, Source	cytochrome P450, family 3, subfamily A, polypeptide 4	10311	-0.059	0.1362	No
83	ENPP5	ENPP5 Entrez, Source	ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative function)	10803	-0.073	0.1031	No
84	CABIN1	CABIN1 Entrez, Source	-	10919	-0.076	0.0986	No
85	AR	AR Entrez, Source	androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)	10940	-0.077	0.1013	No
86	C2	C2 Entrez, Source	complement component 2	11048	-0.080	0.0977	No
87	MUCDHL	MUCDHL Entrez, Source	mucin and cadherin-like	11118	-0.083	0.0970	No
88	SELENBP1	SELENBP1 Entrez, Source	selenium binding protein 1	11162	-0.084	0.0984	No
89	NF1	NF1 Entrez, Source	neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease)	11882	-0.118	0.0506	No
90	KLK3	KLK3 Entrez, Source	kallikrein 3, (prostate specific antigen)	11915	-0.119	0.0548	No
91	ABCC2	ABCC2 Entrez, Source	ATP-binding cassette, sub-family C (CFTR/MRP), member 2	12020	-0.126	0.0539	No
92	RGN	RGN Entrez, Source	regucalcin (senescence marker protein-30)	12427	-0.161	0.0321	No
93	SGPL1	SGPL1 Entrez, Source	sphingosine-1-phosphate lyase 1	12434	-0.162	0.0406	No
94	MPDZ	MPDZ Entrez, Source	multiple PDZ domain protein	12723	-0.209	0.0303	No
95	CRAT	CRAT Entrez, Source	carnitine acetyltransferase	13012	-0.297	0.0249	No