Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_72h_versus_single_gel_72h.class.cls
#double_gel_72h_versus_single_gel_72h_repos
Phenotypeclass.cls#double_gel_72h_versus_single_gel_72h_repos
Upregulated in classdouble_gel_72h
GeneSetIDX_TSA_UP_CLUSTER5
Enrichment Score (ES)0.50810105
Normalized Enrichment Score (NES)1.7770141
Nominal p-value0.0
FDR q-value0.019429456
FWER p-Value0.946
Table: GSEA Results Summary



Fig 1: Enrichment plot: IDX_TSA_UP_CLUSTER5   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LPIN1LPIN1
Entrez,  Source
lipin 11330.3780.0585Yes
2PCPC
Entrez,  Source
pyruvate carboxylase1550.3470.1199Yes
3RASD1RASD1
Entrez,  Source
RAS, dexamethasone-induced 12690.2780.1619Yes
4TIMM8ATIMM8A
Entrez,  Source
translocase of inner mitochondrial membrane 8 homolog A (yeast)4250.2230.1908Yes
5TIMM9TIMM9
Entrez,  Source
translocase of inner mitochondrial membrane 9 homolog (yeast)4630.2120.2264Yes
6TMEM97TMEM97
Entrez,  Source
transmembrane protein 975320.1960.2568Yes
7ATP5G1ATP5G1
Entrez,  Source
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9)5610.1910.2893Yes
8ACSL1ACSL1
Entrez,  Source
acyl-CoA synthetase long-chain family member 16090.1850.3193Yes
9PEX11APEX11A
Entrez,  Source
peroxisomal biogenesis factor 11A6310.1820.3507Yes
10ECHS1ECHS1
Entrez,  Source
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial6330.1820.3837Yes
11ETFBETFB
Entrez,  Source
electron-transfer-flavoprotein, beta polypeptide7460.1680.4057Yes
12PORPOR
Entrez,  Source
P450 (cytochrome) oxidoreductase10300.1420.4102Yes
13ARL6IP2ARL6IP2
Entrez,  Source
ADP-ribosylation factor-like 6 interacting protein 212040.1300.4207Yes
14C3C3
Entrez,  Source
complement component 314750.1140.4211Yes
15MRPL12MRPL12
Entrez,  Source
mitochondrial ribosomal protein L1216520.1070.4272Yes
16MKNK2MKNK2
Entrez,  Source
MAP kinase interacting serine/threonine kinase 217550.1030.4382Yes
17AK2AK2
Entrez,  Source
adenylate kinase 224530.0810.4004Yes
18MRPL34MRPL34
Entrez,  Source
mitochondrial ribosomal protein L3424870.0800.4125Yes
19SDHDSDHD
Entrez,  Source
succinate dehydrogenase complex, subunit D, integral membrane protein25290.0790.4237Yes
20DBIDBI
Entrez,  Source
diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein)25760.0770.4342Yes
21GRPEL1GRPEL1
Entrez,  Source
GrpE-like 1, mitochondrial (E. coli)26910.0740.4390Yes
22NDUFA8NDUFA8
Entrez,  Source
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa27350.0730.4490Yes
23PDCD8PDCD8
Entrez,  Source
programmed cell death 8 (apoptosis-inducing factor)28030.0710.4569Yes
24DNAJB9DNAJB9
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 930360.0660.4514Yes
25PHB2PHB2
Entrez,  Source
prohibitin 231350.0640.4555Yes
26ACO2ACO2
Entrez,  Source
aconitase 2, mitochondrial31360.0640.4671Yes
27TIMM17ATIMM17A
Entrez,  Source
translocase of inner mitochondrial membrane 17 homolog A (yeast)32920.0600.4663Yes
28PIM3PIM3
Entrez,  Source
pim-3 oncogene33910.0580.4695Yes
29GNPATGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase33980.0580.4796Yes
30PEX14PEX14
Entrez,  Source
peroxisomal biogenesis factor 1435650.0540.4770Yes
31PPARGPPARG
Entrez,  Source
peroxisome proliferative activated receptor, gamma35920.0540.4848Yes
32LRRC59LRRC59
Entrez,  Source
leucine rich repeat containing 5936770.0520.4880Yes
33TALDO1TALDO1
Entrez,  Source
transaldolase 140100.0460.4714Yes
34TXNDC14TXNDC14
Entrez,  Source
thioredoxin domain containing 1440670.0450.4753Yes
35COX4NBCOX4NB
Entrez,  Source
COX4 neighbor40720.0450.4832Yes
36COX17COX17
Entrez,  Source
COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)42430.0420.4780Yes
37PRDX3PRDX3
Entrez,  Source
peroxiredoxin 342710.0420.4836Yes
38ACADMACADM
Entrez,  Source
acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain42990.0410.4890Yes
39PHBPHB
Entrez,  Source
prohibitin43090.0410.4958Yes
40COX6A1COX6A1
Entrez,  Source
cytochrome c oxidase subunit VIa polypeptide 143670.0400.4988Yes
41CHPCHP
Entrez,  Source
-43680.0400.5060Yes
42USMG5USMG5
Entrez,  Source
upregulated during skeletal muscle growth 5 homolog (mouse)44350.0390.5081Yes
43SLC5A6SLC5A6
Entrez,  Source
solute carrier family 5 (sodium-dependent vitamin transporter), member 646000.0360.5023No
44IVDIVD
Entrez,  Source
isovaleryl Coenzyme A dehydrogenase47830.0330.4946No
45XBP1XBP1
Entrez,  Source
X-box binding protein 150730.0280.4779No
46ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha51410.0270.4778No
47TOMM40TOMM40
Entrez,  Source
translocase of outer mitochondrial membrane 40 homolog (yeast)52280.0260.4760No
48GPIGPI
Entrez,  Source
glucose phosphate isomerase55820.0210.4531No
49PDIA6PDIA6
Entrez,  Source
protein disulfide isomerase family A, member 656010.0200.4554No
50SIPA1SIPA1
Entrez,  Source
signal-induced proliferation-associated gene 156300.0200.4569No
51MAPK6MAPK6
Entrez,  Source
mitogen-activated protein kinase 658560.0160.4430No
52MTX2MTX2
Entrez,  Source
metaxin 262060.0110.4187No
53PRPS1PRPS1
Entrez,  Source
phosphoribosyl pyrophosphate synthetase 168210.0020.3729No
54PSMA5PSMA5
Entrez,  Source
proteasome (prosome, macropain) subunit, alpha type, 57801-0.0120.3014No
55GPHNGPHN
Entrez,  Source
gephyrin9059-0.0330.2128No
56PSMA1PSMA1
Entrez,  Source
proteasome (prosome, macropain) subunit, alpha type, 19310-0.0380.2009No
57BCAP31BCAP31
Entrez,  Source
B-cell receptor-associated protein 319449-0.0410.1979No
58ALDOAALDOA
Entrez,  Source
aldolase A, fructose-bisphosphate9779-0.0470.1817No
59IFNGR1IFNGR1
Entrez,  Source
interferon gamma receptor 111041-0.0800.1012No
60FDX1FDX1
Entrez,  Source
ferredoxin 111489-0.0990.0855No
61CRATCRAT
Entrez,  Source
carnitine acetyltransferase13012-0.2970.0248No
Table: GSEA details [plain text format]



Fig 2: IDX_TSA_UP_CLUSTER5   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: IDX_TSA_UP_CLUSTER5: Random ES distribution   
Gene set null distribution of ES for IDX_TSA_UP_CLUSTER5