Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_72h_versus_single_gel_72h.class.cls
#double_gel_72h_versus_single_gel_72h_repos
Phenotypeclass.cls#double_gel_72h_versus_single_gel_72h_repos
Upregulated in classdouble_gel_72h
GeneSetLEE_MYC_TGFA_DN
Enrichment Score (ES)0.6649148
Normalized Enrichment Score (NES)2.211613
Nominal p-value0.0
FDR q-value1.8297805E-4
FWER p-Value0.0050
Table: GSEA Results Summary



Fig 1: Enrichment plot: LEE_MYC_TGFA_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FABP1FABP1
Entrez,  Source
fatty acid binding protein 1, liver21.1120.0898Yes
2SLC27A5SLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 590.7790.1524Yes
3OTCOTC
Entrez,  Source
ornithine carbamoyltransferase440.5060.1907Yes
4G0S2G0S2
Entrez,  Source
G0/G1switch 2660.4610.2264Yes
5KHKKHK
Entrez,  Source
ketohexokinase (fructokinase)930.4220.2586Yes
6BHMTBHMT
Entrez,  Source
betaine-homocysteine methyltransferase1060.4150.2912Yes
7GOT1GOT1
Entrez,  Source
glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)1100.4030.3236Yes
8G6PCG6PC
Entrez,  Source
glucose-6-phosphatase, catalytic subunit1290.3830.3532Yes
9C4BPAC4BPA
Entrez,  Source
complement component 4 binding protein, alpha1760.3310.3765Yes
10ABATABAT
Entrez,  Source
4-aminobutyrate aminotransferase1850.3210.4019Yes
11AQP8AQP8
Entrez,  Source
aquaporin 81950.3120.4265Yes
12PXMP2PXMP2
Entrez,  Source
peroxisomal membrane protein 2, 22kDa2020.3090.4510Yes
13CPT2CPT2
Entrez,  Source
carnitine palmitoyltransferase II2070.3070.4755Yes
14RGS16RGS16
Entrez,  Source
regulator of G-protein signalling 162580.2850.4948Yes
15ACOX1ACOX1
Entrez,  Source
acyl-Coenzyme A oxidase 1, palmitoyl2660.2810.5170Yes
16KLF15KLF15
Entrez,  Source
Kruppel-like factor 152780.2750.5384Yes
17EPHX2EPHX2
Entrez,  Source
epoxide hydrolase 2, cytoplasmic2820.2740.5604Yes
18TDO2TDO2
Entrez,  Source
tryptophan 2,3-dioxygenase3580.2450.5746Yes
19HSD11B1HSD11B1
Entrez,  Source
hydroxysteroid (11-beta) dehydrogenase 13700.2420.5933Yes
20HALHAL
Entrez,  Source
histidine ammonia-lyase4230.2240.6075Yes
21IGFALSIGFALS
Entrez,  Source
insulin-like growth factor binding protein, acid labile subunit5330.1960.6152Yes
22NR1H3NR1H3
Entrez,  Source
nuclear receptor subfamily 1, group H, member 35830.1880.6267Yes
23BAATBAAT
Entrez,  Source
bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase)5970.1860.6408Yes
24KYNUKYNU
Entrez,  Source
kynureninase (L-kynurenine hydrolase)6950.1740.6475Yes
25OATOAT
Entrez,  Source
ornithine aminotransferase (gyrate atrophy)8930.1540.6451Yes
26CYP4F2CYP4F2
Entrez,  Source
cytochrome P450, family 4, subfamily F, polypeptide 29330.1500.6543Yes
27CA5ACA5A
Entrez,  Source
carbonic anhydrase VA, mitochondrial10340.1420.6583Yes
28HADH2HADH2
Entrez,  Source
hydroxyacyl-Coenzyme A dehydrogenase, type II10950.1370.6649Yes
29IGF1IGF1
Entrez,  Source
insulin-like growth factor 1 (somatomedin C)14710.1150.6460No
30SLC25A22SLC25A22
Entrez,  Source
solute carrier family 25 (mitochondrial carrier: glutamate), member 2221400.0900.6030No
31ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A122390.0870.6026No
32HLA-DMAHLA-DMA
Entrez,  Source
major histocompatibility complex, class II, DM alpha26970.0740.5742No
33FABP2FABP2
Entrez,  Source
fatty acid binding protein 2, intestinal29720.0670.5590No
34EGFREGFR
Entrez,  Source
epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)40790.0450.4795No
35HPDHPD
Entrez,  Source
4-hydroxyphenylpyruvate dioxygenase43830.0400.4599No
36ELOVL5ELOVL5
Entrez,  Source
ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)49960.0290.4162No
37ALAS2ALAS2
Entrez,  Source
aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)56060.0200.3720No
38PCK1PCK1
Entrez,  Source
phosphoenolpyruvate carboxykinase 1 (soluble)60260.0140.3416No
39CRISP2CRISP2
Entrez,  Source
cysteine-rich secretory protein 262100.0110.3287No
40CMAHCMAH
Entrez,  Source
cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase)7234-0.0040.2521No
41ABCG2ABCG2
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 28071-0.0160.1905No
42CYP7B1CYP7B1
Entrez,  Source
cytochrome P450, family 7, subfamily B, polypeptide 19114-0.0340.1149No
43GPR37GPR37
Entrez,  Source
G protein-coupled receptor 37 (endothelin receptor type B-like)9392-0.0400.0972No
44PSEN2PSEN2
Entrez,  Source
presenilin 2 (Alzheimer disease 4)10691-0.0700.0052No
45MAPKAPK2MAPKAPK2
Entrez,  Source
mitogen-activated protein kinase-activated protein kinase 211727-0.110-0.0637No
46IL1RAPIL1RAP
Entrez,  Source
interleukin 1 receptor accessory protein11842-0.116-0.0629No
47TRPV2TRPV2
Entrez,  Source
transient receptor potential cation channel, subfamily V, member 211876-0.118-0.0559No
48RGNRGN
Entrez,  Source
regucalcin (senescence marker protein-30)12427-0.161-0.0842No
49LIPCLIPC
Entrez,  Source
lipase, hepatic13275-0.650-0.0953No
50CA3CA3
Entrez,  Source
carbonic anhydrase III, muscle specific13334-1.2400.0006No
Table: GSEA details [plain text format]



Fig 2: LEE_MYC_TGFA_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: LEE_MYC_TGFA_DN: Random ES distribution   
Gene set null distribution of ES for LEE_MYC_TGFA_DN