Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | REGULATION_OF_GENE_EXPRESSION__EPIGENETIC |
| Enrichment Score (ES) | 0.6566485 |
| Normalized Enrichment Score (NES) | 1.6762825 |
| Nominal p-value | 0.008213553 |
| FDR q-value | 0.043052264 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 0 | 1.284 | 0.6566 | Yes |
| 2 | DNMT3B | DNMT3B Entrez, Source | DNA (cytosine-5-)-methyltransferase 3 beta | 2369 | 0.083 | 0.5216 | No |
| 3 | PICK1 | PICK1 Entrez, Source | protein interacting with PRKCA 1 | 2572 | 0.077 | 0.5460 | No |
| 4 | DICER1 | DICER1 Entrez, Source | Dicer1, Dcr-1 homolog (Drosophila) | 4713 | 0.034 | 0.4029 | No |
| 5 | ATRX | ATRX Entrez, Source | alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | 5030 | 0.029 | 0.3938 | No |
| 6 | SIRT5 | SIRT5 Entrez, Source | sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) | 5756 | 0.018 | 0.3486 | No |
| 7 | IGF2 | IGF2 Entrez, Source | insulin-like growth factor 2 (somatomedin A) | 6610 | 0.005 | 0.2872 | No |
| 8 | TNP1 | TNP1 Entrez, Source | transition protein 1 (during histone to protamine replacement) | 7099 | -0.002 | 0.2515 | No |
| 9 | GATAD2A | GATAD2A Entrez, Source | GATA zinc finger domain containing 2A | 7168 | -0.003 | 0.2477 | No |
| 10 | GLMN | GLMN Entrez, Source | glomulin, FKBP associated protein | 7210 | -0.003 | 0.2463 | No |
| 11 | DNMT3A | DNMT3A Entrez, Source | DNA (cytosine-5-)-methyltransferase 3 alpha | 9156 | -0.035 | 0.1182 | No |
| 12 | DNMT1 | DNMT1 Entrez, Source | DNA (cytosine-5-)-methyltransferase 1 | 9405 | -0.040 | 0.1200 | No |
| 13 | H2AFY | H2AFY Entrez, Source | H2A histone family, member Y | 10956 | -0.077 | 0.0431 | No |
| 14 | HMGA1 | HMGA1 Entrez, Source | high mobility group AT-hook 1 | 11163 | -0.084 | 0.0707 | No |
| 15 | GPX1 | GPX1 Entrez, Source | glutathione peroxidase 1 | 11279 | -0.089 | 0.1077 | No |
| 16 | HDAC5 | HDAC5 Entrez, Source | histone deacetylase 5 | 11330 | -0.092 | 0.1510 | No |
