Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | RESPONSE_TO_ORGANIC_SUBSTANCE |
| Enrichment Score (ES) | 0.57429266 |
| Normalized Enrichment Score (NES) | 1.6142727 |
| Nominal p-value | 0.010638298 |
| FDR q-value | 0.06354631 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | APOA2 | APOA2 Entrez, Source | apolipoprotein A-II | 22 | 0.601 | 0.1680 | Yes |
| 2 | AQP9 | AQP9 Entrez, Source | aquaporin 9 | 38 | 0.530 | 0.3164 | Yes |
| 3 | GCK | GCK Entrez, Source | glucokinase (hexokinase 4, maturity onset diabetes of the young 2) | 140 | 0.368 | 0.4127 | Yes |
| 4 | ABAT | ABAT Entrez, Source | 4-aminobutyrate aminotransferase | 185 | 0.321 | 0.5002 | Yes |
| 5 | GYS2 | GYS2 Entrez, Source | glycogen synthase 2 (liver) | 314 | 0.263 | 0.5647 | Yes |
| 6 | ME1 | ME1 Entrez, Source | malic enzyme 1, NADP(+)-dependent, cytosolic | 800 | 0.163 | 0.5743 | Yes |
| 7 | EIF2B1 | EIF2B1 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa | 2303 | 0.085 | 0.4855 | No |
| 8 | GLRX2 | GLRX2 Entrez, Source | glutaredoxin 2 | 2722 | 0.073 | 0.4748 | No |
| 9 | EIF2B3 | EIF2B3 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa | 3277 | 0.061 | 0.4503 | No |
| 10 | EIF2B4 | EIF2B4 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa | 4558 | 0.037 | 0.3646 | No |
| 11 | NDUFS4 | NDUFS4 Entrez, Source | NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) | 4753 | 0.033 | 0.3595 | No |
| 12 | EIF2B5 | EIF2B5 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa | 4827 | 0.032 | 0.3630 | No |
| 13 | GOT2 | GOT2 Entrez, Source | glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) | 5916 | 0.015 | 0.2857 | No |
| 14 | BRCA2 | BRCA2 Entrez, Source | breast cancer 2, early onset | 5924 | 0.015 | 0.2895 | No |
| 15 | CHRNA7 | CHRNA7 Entrez, Source | cholinergic receptor, nicotinic, alpha 7 | 7665 | -0.010 | 0.1617 | No |
| 16 | SOD1 | SOD1 Entrez, Source | superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult)) | 7883 | -0.013 | 0.1492 | No |
| 17 | CHRNA4 | CHRNA4 Entrez, Source | cholinergic receptor, nicotinic, alpha 4 | 8499 | -0.023 | 0.1095 | No |
| 18 | BCL2 | BCL2 Entrez, Source | B-cell CLL/lymphoma 2 | 8887 | -0.030 | 0.0888 | No |
| 19 | DUOX2 | DUOX2 Entrez, Source | dual oxidase 2 | 9524 | -0.042 | 0.0529 | No |
| 20 | CHRNB2 | CHRNB2 Entrez, Source | cholinergic receptor, nicotinic, beta 2 (neuronal) | 9835 | -0.049 | 0.0434 | No |
| 21 | RELA | RELA Entrez, Source | v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian) | 10137 | -0.055 | 0.0364 | No |
| 22 | EIF2B2 | EIF2B2 Entrez, Source | eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa | 10173 | -0.056 | 0.0495 | No |
| 23 | SUPT5H | SUPT5H Entrez, Source | suppressor of Ty 5 homolog (S. cerevisiae) | 10327 | -0.060 | 0.0549 | No |
| 24 | CDH13 | CDH13 Entrez, Source | cadherin 13, H-cadherin (heart) | 12630 | -0.190 | -0.0643 | No |
| 25 | ABCG1 | ABCG1 Entrez, Source | ATP-binding cassette, sub-family G (WHITE), member 1 | 13162 | -0.417 | 0.0135 | No |
