Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | SPECIFIC_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY |
| Enrichment Score (ES) | 0.6669083 |
| Normalized Enrichment Score (NES) | 1.6825215 |
| Nominal p-value | 0.010964912 |
| FDR q-value | 0.04119966 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 0 | 1.284 | 0.6178 | Yes |
| 2 | RXRA | RXRA Entrez, Source | retinoid X receptor, alpha | 566 | 0.190 | 0.6669 | Yes |
| 3 | SOX9 | SOX9 Entrez, Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 2781 | 0.072 | 0.5353 | No |
| 4 | ATF4 | ATF4 Entrez, Source | activating transcription factor 4 (tax-responsive enhancer element B67) | 3058 | 0.065 | 0.5460 | No |
| 5 | NOTCH2 | NOTCH2 Entrez, Source | Notch homolog 2 (Drosophila) | 3989 | 0.047 | 0.4986 | No |
| 6 | PKNOX1 | PKNOX1 Entrez, Source | PBX/knotted 1 homeobox 1 | 5077 | 0.028 | 0.4304 | No |
| 7 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 7382 | -0.006 | 0.2603 | No |
| 8 | ZNF148 | ZNF148 Entrez, Source | zinc finger protein 148 | 7480 | -0.007 | 0.2565 | No |
| 9 | IRF7 | IRF7 Entrez, Source | interferon regulatory factor 7 | 7849 | -0.013 | 0.2351 | No |
| 10 | NR2F1 | NR2F1 Entrez, Source | nuclear receptor subfamily 2, group F, member 1 | 8175 | -0.018 | 0.2191 | No |
| 11 | RXRB | RXRB Entrez, Source | retinoid X receptor, beta | 9083 | -0.034 | 0.1673 | No |
| 12 | NR0B1 | NR0B1 Entrez, Source | nuclear receptor subfamily 0, group B, member 1 | 9783 | -0.047 | 0.1377 | No |
| 13 | BRD8 | BRD8 Entrez, Source | bromodomain containing 8 | 10521 | -0.065 | 0.1135 | No |
| 14 | USF1 | USF1 Entrez, Source | upstream transcription factor 1 | 11103 | -0.082 | 0.1094 | No |
| 15 | DEK | DEK Entrez, Source | DEK oncogene (DNA binding) | 11951 | -0.122 | 0.1044 | No |
