Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_72h_versus_single_gel_72h.class.cls #double_gel_72h_versus_single_gel_72h_repos |
| Phenotype | class.cls#double_gel_72h_versus_single_gel_72h_repos |
| Upregulated in class | single_gel_72h |
| GeneSet | STRIATED_MUSCLE_DEVELOPMENT |
| Enrichment Score (ES) | -0.6405074 |
| Normalized Enrichment Score (NES) | -1.7254965 |
| Nominal p-value | 0.007490637 |
| FDR q-value | 0.05404694 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | IFRD1 | IFRD1 Entrez, Source | interferon-related developmental regulator 1 | 1449 | 0.116 | -0.0728 | No |
| 2 | BMP4 | BMP4 Entrez, Source | bone morphogenetic protein 4 | 1526 | 0.112 | -0.0437 | No |
| 3 | MBNL1 | MBNL1 Entrez, Source | muscleblind-like (Drosophila) | 2291 | 0.085 | -0.0745 | No |
| 4 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 3018 | 0.066 | -0.1084 | No |
| 5 | COL4A4 | COL4A4 Entrez, Source | collagen, type IV, alpha 4 | 4358 | 0.040 | -0.1965 | No |
| 6 | KCNH1 | KCNH1 Entrez, Source | potassium voltage-gated channel, subfamily H (eag-related), member 1 | 4901 | 0.031 | -0.2276 | No |
| 7 | CHRNA1 | CHRNA1 Entrez, Source | cholinergic receptor, nicotinic, alpha 1 (muscle) | 5541 | 0.021 | -0.2690 | No |
| 8 | TTN | TTN Entrez, Source | titin | 5994 | 0.014 | -0.2986 | No |
| 9 | CSRP3 | CSRP3 Entrez, Source | cysteine and glycine-rich protein 3 (cardiac LIM protein) | 6325 | 0.009 | -0.3205 | No |
| 10 | CACNA1H | CACNA1H Entrez, Source | calcium channel, voltage-dependent, alpha 1H subunit | 6388 | 0.008 | -0.3226 | No |
| 11 | NRD1 | NRD1 Entrez, Source | nardilysin (N-arginine dibasic convertase) | 6449 | 0.007 | -0.3249 | No |
| 12 | TBX3 | TBX3 Entrez, Source | T-box 3 (ulnar mammary syndrome) | 6476 | 0.007 | -0.3248 | No |
| 13 | MYH11 | MYH11 Entrez, Source | myosin, heavy chain 11, smooth muscle | 6721 | 0.004 | -0.3420 | No |
| 14 | MYOD1 | MYOD1 Entrez, Source | myogenic differentiation 1 | 7324 | -0.005 | -0.3857 | No |
| 15 | CACNB2 | CACNB2 Entrez, Source | calcium channel, voltage-dependent, beta 2 subunit | 8013 | -0.015 | -0.4326 | No |
| 16 | UBB | UBB Entrez, Source | ubiquitin B | 8839 | -0.029 | -0.4856 | No |
| 17 | TGFB1 | TGFB1 Entrez, Source | transforming growth factor, beta 1 (Camurati-Engelmann disease) | 10788 | -0.072 | -0.6093 | No |
| 18 | MYEF2 | MYEF2 Entrez, Source | myelin expression factor 2 | 11204 | -0.086 | -0.6138 | Yes |
| 19 | HDAC5 | HDAC5 Entrez, Source | histone deacetylase 5 | 11330 | -0.092 | -0.5946 | Yes |
| 20 | SIRT2 | SIRT2 Entrez, Source | sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae) | 11576 | -0.103 | -0.5809 | Yes |
| 21 | MYF6 | MYF6 Entrez, Source | myogenic factor 6 (herculin) | 11986 | -0.124 | -0.5731 | Yes |
| 22 | MAPK12 | MAPK12 Entrez, Source | mitogen-activated protein kinase 12 | 12330 | -0.151 | -0.5520 | Yes |
| 23 | NOTCH1 | NOTCH1 Entrez, Source | Notch homolog 1, translocation-associated (Drosophila) | 12628 | -0.189 | -0.5155 | Yes |
| 24 | HDAC7A | HDAC7A Entrez, Source | histone deacetylase 7A | 12873 | -0.243 | -0.4582 | Yes |
| 25 | ACTA1 | ACTA1 Entrez, Source | actin, alpha 1, skeletal muscle | 13340 | -1.586 | 0.0002 | Yes |
