Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | AGTCTTA,MIR-499 |
| Enrichment Score (ES) | -0.46371067 |
| Normalized Enrichment Score (NES) | -1.4316964 |
| Nominal p-value | 0.08108108 |
| FDR q-value | 0.26326275 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PLAG1 | PLAG1 Entrez, Source | pleiomorphic adenoma gene 1 | 1115 | 0.169 | -0.0360 | No |
| 2 | ZFHX1B | ZFHX1B Entrez, Source | zinc finger homeobox 1b | 1427 | 0.140 | -0.0197 | No |
| 3 | CUGBP2 | CUGBP2 Entrez, Source | CUG triplet repeat, RNA binding protein 2 | 1501 | 0.135 | 0.0129 | No |
| 4 | TRAM1 | TRAM1 Entrez, Source | translocation associated membrane protein 1 | 1970 | 0.109 | 0.0085 | No |
| 5 | RIC8B | RIC8B Entrez, Source | resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) | 2332 | 0.094 | 0.0080 | No |
| 6 | MARCKS | MARCKS Entrez, Source | myristoylated alanine-rich protein kinase C substrate | 2595 | 0.084 | 0.0119 | No |
| 7 | ENPP2 | ENPP2 Entrez, Source | ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) | 2952 | 0.072 | 0.0056 | No |
| 8 | PDCD4 | PDCD4 Entrez, Source | programmed cell death 4 (neoplastic transformation inhibitor) | 3035 | 0.070 | 0.0193 | No |
| 9 | NOVA1 | NOVA1 Entrez, Source | neuro-oncological ventral antigen 1 | 3664 | 0.053 | -0.0129 | No |
| 10 | VCPIP1 | VCPIP1 Entrez, Source | valosin containing protein (p97)/p47 complex interacting protein 1 | 4223 | 0.039 | -0.0438 | No |
| 11 | ESRRG | ESRRG Entrez, Source | estrogen-related receptor gamma | 4402 | 0.036 | -0.0471 | No |
| 12 | SDC2 | SDC2 Entrez, Source | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) | 4569 | 0.033 | -0.0503 | No |
| 13 | MYEF2 | MYEF2 Entrez, Source | myelin expression factor 2 | 5302 | 0.019 | -0.1000 | No |
| 14 | SOX11 | SOX11 Entrez, Source | SRY (sex determining region Y)-box 11 | 5542 | 0.014 | -0.1141 | No |
| 15 | TMED9 | TMED9 Entrez, Source | transmembrane emp24 protein transport domain containing 9 | 5739 | 0.010 | -0.1259 | No |
| 16 | H2AFZ | H2AFZ Entrez, Source | H2A histone family, member Z | 6380 | -0.001 | -0.1736 | No |
| 17 | RNF44 | RNF44 Entrez, Source | ring finger protein 44 | 6743 | -0.008 | -0.1986 | No |
| 18 | TOP1 | TOP1 Entrez, Source | topoisomerase (DNA) I | 7017 | -0.013 | -0.2155 | No |
| 19 | ADAM10 | ADAM10 Entrez, Source | ADAM metallopeptidase domain 10 | 7189 | -0.016 | -0.2240 | No |
| 20 | PPP3CA | PPP3CA Entrez, Source | protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (calcineurin A alpha) | 7229 | -0.017 | -0.2222 | No |
| 21 | SEC11L1 | SEC11L1 Entrez, Source | SEC11-like 1 (S. cerevisiae) | 8076 | -0.033 | -0.2765 | No |
| 22 | KIF3C | KIF3C Entrez, Source | kinesin family member 3C | 8145 | -0.034 | -0.2719 | No |
| 23 | KPNA3 | KPNA3 Entrez, Source | karyopherin alpha 3 (importin alpha 4) | 8218 | -0.036 | -0.2673 | No |
| 24 | TESK2 | TESK2 Entrez, Source | testis-specific kinase 2 | 9339 | -0.059 | -0.3347 | No |
| 25 | MAPK6 | MAPK6 Entrez, Source | mitogen-activated protein kinase 6 | 10508 | -0.090 | -0.3970 | No |
| 26 | NAV2 | NAV2 Entrez, Source | neuron navigator 2 | 11397 | -0.125 | -0.4285 | Yes |
| 27 | UBE2V2 | UBE2V2 Entrez, Source | ubiquitin-conjugating enzyme E2 variant 2 | 11529 | -0.130 | -0.4015 | Yes |
| 28 | RCN2 | RCN2 Entrez, Source | reticulocalbin 2, EF-hand calcium binding domain | 11596 | -0.133 | -0.3688 | Yes |
| 29 | DDX1 | DDX1 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 | 11603 | -0.133 | -0.3316 | Yes |
| 30 | HNRPC | HNRPC Entrez, Source | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 11772 | -0.143 | -0.3039 | Yes |
| 31 | ROD1 | ROD1 Entrez, Source | ROD1 regulator of differentiation 1 (S. pombe) | 11981 | -0.156 | -0.2754 | Yes |
| 32 | MECP2 | MECP2 Entrez, Source | methyl CpG binding protein 2 (Rett syndrome) | 12609 | -0.212 | -0.2626 | Yes |
| 33 | QKI | QKI Entrez, Source | quaking homolog, KH domain RNA binding (mouse) | 12737 | -0.231 | -0.2070 | Yes |
| 34 | PTBP2 | PTBP2 Entrez, Source | polypyrimidine tract binding protein 2 | 12789 | -0.239 | -0.1432 | Yes |
| 35 | ZBTB10 | ZBTB10 Entrez, Source | zinc finger and BTB domain containing 10 | 13050 | -0.307 | -0.0760 | Yes |
| 36 | SOX6 | SOX6 Entrez, Source | SRY (sex determining region Y)-box 6 | 13131 | -0.346 | 0.0159 | Yes |
