Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | BASSO_HCL_DIFF |
| Enrichment Score (ES) | 0.6934892 |
| Normalized Enrichment Score (NES) | 2.1771529 |
| Nominal p-value | 0.0 |
| FDR q-value | 8.851585E-4 |
| FWER p-Value | 0.0050 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 25 | 0.995 | 0.1141 | Yes |
| 2 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 31 | 0.935 | 0.2227 | Yes |
| 3 | TACC1 | TACC1 Entrez, Source | transforming, acidic coiled-coil containing protein 1 | 80 | 0.688 | 0.2993 | Yes |
| 4 | DPYD | DPYD Entrez, Source | dihydropyrimidine dehydrogenase | 112 | 0.632 | 0.3706 | Yes |
| 5 | EMP1 | EMP1 Entrez, Source | epithelial membrane protein 1 | 119 | 0.621 | 0.4425 | Yes |
| 6 | IL1R2 | IL1R2 Entrez, Source | interleukin 1 receptor, type II | 140 | 0.582 | 0.5089 | Yes |
| 7 | PRSS23 | PRSS23 Entrez, Source | protease, serine, 23 | 201 | 0.487 | 0.5611 | Yes |
| 8 | SPRY2 | SPRY2 Entrez, Source | sprouty homolog 2 (Drosophila) | 314 | 0.388 | 0.5979 | Yes |
| 9 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 391 | 0.341 | 0.6319 | Yes |
| 10 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 533 | 0.274 | 0.6532 | Yes |
| 11 | PAWR | PAWR Entrez, Source | PRKC, apoptosis, WT1, regulator | 899 | 0.196 | 0.6486 | Yes |
| 12 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 1095 | 0.171 | 0.6539 | Yes |
| 13 | PDE4DIP | PDE4DIP Entrez, Source | phosphodiesterase 4D interacting protein (myomegalin) | 1134 | 0.167 | 0.6705 | Yes |
| 14 | MYF6 | MYF6 Entrez, Source | myogenic factor 6 (herculin) | 1275 | 0.153 | 0.6778 | Yes |
| 15 | TRIM2 | TRIM2 Entrez, Source | tripartite motif-containing 2 | 1300 | 0.150 | 0.6935 | Yes |
| 16 | PTTG1IP | PTTG1IP Entrez, Source | pituitary tumor-transforming 1 interacting protein | 1829 | 0.115 | 0.6672 | No |
| 17 | VAMP3 | VAMP3 Entrez, Source | vesicle-associated membrane protein 3 (cellubrevin) | 2057 | 0.105 | 0.6624 | No |
| 18 | PPIC | PPIC Entrez, Source | peptidylprolyl isomerase C (cyclophilin C) | 2432 | 0.090 | 0.6448 | No |
| 19 | GABARAPL2 | GABARAPL2 Entrez, Source | GABA(A) receptor-associated protein-like 2 | 2693 | 0.081 | 0.6346 | No |
| 20 | RCBTB2 | RCBTB2 Entrez, Source | regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 | 2710 | 0.080 | 0.6427 | No |
| 21 | HBB | HBB Entrez, Source | hemoglobin, beta | 2786 | 0.077 | 0.6461 | No |
| 22 | MAPK10 | MAPK10 Entrez, Source | mitogen-activated protein kinase 10 | 2865 | 0.075 | 0.6490 | No |
| 23 | FGF2 | FGF2 Entrez, Source | fibroblast growth factor 2 (basic) | 3210 | 0.065 | 0.6308 | No |
| 24 | IL3RA | IL3RA Entrez, Source | interleukin 3 receptor, alpha (low affinity) | 3303 | 0.063 | 0.6311 | No |
| 25 | IL18 | IL18 Entrez, Source | interleukin 18 (interferon-gamma-inducing factor) | 3503 | 0.057 | 0.6229 | No |
| 26 | NOVA1 | NOVA1 Entrez, Source | neuro-oncological ventral antigen 1 | 3664 | 0.053 | 0.6170 | No |
| 27 | SMPDL3A | SMPDL3A Entrez, Source | sphingomyelin phosphodiesterase, acid-like 3A | 3776 | 0.051 | 0.6146 | No |
| 28 | GAS7 | GAS7 Entrez, Source | growth arrest-specific 7 | 5052 | 0.023 | 0.5214 | No |
| 29 | AIF1 | AIF1 Entrez, Source | allograft inflammatory factor 1 | 5694 | 0.011 | 0.4745 | No |
| 30 | CTBP2 | CTBP2 Entrez, Source | C-terminal binding protein 2 | 5997 | 0.005 | 0.4524 | No |
| 31 | PTPRM | PTPRM Entrez, Source | protein tyrosine phosphatase, receptor type, M | 6136 | 0.003 | 0.4423 | No |
| 32 | SIX3 | SIX3 Entrez, Source | sine oculis homeobox homolog 3 (Drosophila) | 6316 | -0.000 | 0.4289 | No |
| 33 | TCF4 | TCF4 Entrez, Source | transcription factor 4 | 6338 | -0.001 | 0.4274 | No |
| 34 | SDC3 | SDC3 Entrez, Source | syndecan 3 (N-syndecan) | 6486 | -0.003 | 0.4167 | No |
| 35 | DLC1 | DLC1 Entrez, Source | deleted in liver cancer 1 | 6645 | -0.006 | 0.4055 | No |
| 36 | BLR1 | BLR1 Entrez, Source | Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) | 6697 | -0.007 | 0.4025 | No |
| 37 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 6718 | -0.007 | 0.4019 | No |
| 38 | RAB13 | RAB13 Entrez, Source | RAB13, member RAS oncogene family | 7013 | -0.013 | 0.3812 | No |
| 39 | B2M | B2M Entrez, Source | beta-2-microglobulin | 7066 | -0.014 | 0.3789 | No |
| 40 | RPLP1 | RPLP1 Entrez, Source | ribosomal protein, large, P1 | 7767 | -0.027 | 0.3294 | No |
| 41 | FGFR1 | FGFR1 Entrez, Source | fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) | 7859 | -0.028 | 0.3258 | No |
| 42 | TNFRSF1A | TNFRSF1A Entrez, Source | tumor necrosis factor receptor superfamily, member 1A | 8306 | -0.037 | 0.2967 | No |
| 43 | SCN1B | SCN1B Entrez, Source | sodium channel, voltage-gated, type I, beta | 9094 | -0.054 | 0.2437 | No |
| 44 | RTN2 | RTN2 Entrez, Source | reticulon 2 | 10941 | -0.106 | 0.1173 | No |
| 45 | ENG | ENG Entrez, Source | endoglin (Osler-Rendu-Weber syndrome 1) | 11119 | -0.113 | 0.1171 | No |
| 46 | CD63 | CD63 Entrez, Source | CD63 molecule | 11299 | -0.120 | 0.1177 | No |
| 47 | TBKBP1 | TBKBP1 Entrez, Source | TBK1 binding protein 1 | 13053 | -0.308 | 0.0217 | No |
