Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_24h.class.cls #double_gel_8d_versus_double_gel_24h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_24h_repos |
| Upregulated in class | double_gel_24h |
| GeneSet | CANCER_UNDIFFERENTIATED_META_UP |
| Enrichment Score (ES) | -0.4212848 |
| Normalized Enrichment Score (NES) | -1.3317544 |
| Nominal p-value | 0.10550459 |
| FDR q-value | 0.37868708 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 12 | 1.254 | 0.1932 | No |
| 2 | TMSB10 | TMSB10 Entrez, Source | thymosin, beta 10 | 476 | 0.294 | 0.2038 | No |
| 3 | KIF2C | KIF2C Entrez, Source | kinesin family member 2C | 1116 | 0.169 | 0.1819 | No |
| 4 | NUDT1 | NUDT1 Entrez, Source | nudix (nucleoside diphosphate linked moiety X)-type motif 1 | 1996 | 0.108 | 0.1325 | No |
| 5 | KIAA0101 | KIAA0101 Entrez, Source | KIAA0101 | 2376 | 0.093 | 0.1184 | No |
| 6 | GAS6 | GAS6 Entrez, Source | growth arrest-specific 6 | 3043 | 0.070 | 0.0792 | No |
| 7 | IFI30 | IFI30 Entrez, Source | interferon, gamma-inducible protein 30 | 4454 | 0.035 | -0.0214 | No |
| 8 | PRDX4 | PRDX4 Entrez, Source | peroxiredoxin 4 | 4953 | 0.025 | -0.0550 | No |
| 9 | CCNA2 | CCNA2 Entrez, Source | cyclin A2 | 5186 | 0.020 | -0.0692 | No |
| 10 | FOXM1 | FOXM1 Entrez, Source | forkhead box M1 | 5218 | 0.020 | -0.0685 | No |
| 11 | BIRC5 | BIRC5 Entrez, Source | baculoviral IAP repeat-containing 5 (survivin) | 5848 | 0.008 | -0.1145 | No |
| 12 | H2AFZ | H2AFZ Entrez, Source | H2A histone family, member Z | 6380 | -0.001 | -0.1542 | No |
| 13 | PSMD2 | PSMD2 Entrez, Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 | 6801 | -0.009 | -0.1844 | No |
| 14 | CTSL | CTSL Entrez, Source | cathepsin L | 7390 | -0.020 | -0.2256 | No |
| 15 | KPNA2 | KPNA2 Entrez, Source | karyopherin alpha 2 (RAG cohort 1, importin alpha 1) | 8037 | -0.032 | -0.2692 | No |
| 16 | ADRM1 | ADRM1 Entrez, Source | adhesion regulating molecule 1 | 8079 | -0.033 | -0.2671 | No |
| 17 | CDKN3 | CDKN3 Entrez, Source | cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) | 8545 | -0.042 | -0.2955 | No |
| 18 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 9093 | -0.054 | -0.3283 | No |
| 19 | CCNB1 | CCNB1 Entrez, Source | cyclin B1 | 9610 | -0.066 | -0.3569 | No |
| 20 | SSBP1 | SSBP1 Entrez, Source | single-stranded DNA binding protein 1 | 9677 | -0.067 | -0.3515 | No |
| 21 | GARS | GARS Entrez, Source | glycyl-tRNA synthetase | 9975 | -0.076 | -0.3621 | No |
| 22 | PSMB7 | PSMB7 Entrez, Source | proteasome (prosome, macropain) subunit, beta type, 7 | 10088 | -0.079 | -0.3583 | No |
| 23 | NME1 | NME1 Entrez, Source | non-metastatic cells 1, protein (NM23A) expressed in | 10156 | -0.080 | -0.3509 | No |
| 24 | EIF2S2 | EIF2S2 Entrez, Source | eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa | 10288 | -0.084 | -0.3477 | No |
| 25 | CCT6A | CCT6A Entrez, Source | chaperonin containing TCP1, subunit 6A (zeta 1) | 10929 | -0.106 | -0.3795 | No |
| 26 | TOP2A | TOP2A Entrez, Source | topoisomerase (DNA) II alpha 170kDa | 11410 | -0.125 | -0.3962 | Yes |
| 27 | CDC20 | CDC20 Entrez, Source | CDC20 cell division cycle 20 homolog (S. cerevisiae) | 11434 | -0.126 | -0.3784 | Yes |
| 28 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 11449 | -0.127 | -0.3598 | Yes |
| 29 | TRIP13 | TRIP13 Entrez, Source | thyroid hormone receptor interactor 13 | 12163 | -0.169 | -0.3872 | Yes |
| 30 | GGH | GGH Entrez, Source | gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) | 12617 | -0.213 | -0.3883 | Yes |
| 31 | TAP1 | TAP1 Entrez, Source | transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) | 12632 | -0.215 | -0.3560 | Yes |
| 32 | SLC16A1 | SLC16A1 Entrez, Source | solute carrier family 16, member 1 (monocarboxylic acid transporter 1) | 12730 | -0.229 | -0.3278 | Yes |
| 33 | GCLM | GCLM Entrez, Source | glutamate-cysteine ligase, modifier subunit | 12784 | -0.238 | -0.2950 | Yes |
| 34 | TUBB | TUBB Entrez, Source | tubulin, beta | 12860 | -0.256 | -0.2611 | Yes |
| 35 | SLC7A5 | SLC7A5 Entrez, Source | solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | 12884 | -0.262 | -0.2222 | Yes |
| 36 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13288 | -0.553 | -0.1669 | Yes |
| 37 | CXCL9 | CXCL9 Entrez, Source | chemokine (C-X-C motif) ligand 9 | 13337 | -1.105 | 0.0004 | Yes |
